prot_Ecto-sp9_F_contig9570.17692.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9570.17692.1
Unique Nameprot_Ecto-sp9_F_contig9570.17692.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length75
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9570.17692.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR06_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 8.460e-12
Identity = 32/41 (78.05%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   35 GGSVGVCRCSRRTYQSGEQQQGVW-PVGGRSRSPLGNGAKT 74
            GGSVG+CRCSRR YQ GEQ QG + PV GRSRSPLGNG KT
Sbjct:   37 GGSVGICRCSRRAYQGGEQPQGFFLPVVGRSRSPLGNGEKT 77
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BLAST of mRNA_Ecto-sp9_F_contig9570.17692.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB56_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.990e-10
Identity = 30/41 (73.17%), Postives = 31/41 (75.61%), Query Frame = 0 
Query:   35 GGSVGVCRCSRRTYQSGEQQQGVWPVGGRSRSPLGNGAKTP 75
            GGSV +CRCSRR YQ GEQQQG   VG  SRSPLGNG  TP
Sbjct:   38 GGSVRICRCSRRAYQGGEQQQGSLLVGWWSRSPLGNGVNTP 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9570.17692.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.460e-1278.05protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.990e-1073.17protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9570contigEcto-sp9_F_contig9570:970..1194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9570.17692.1mRNA_Ecto-sp9_F_contig9570.17692.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9570 968..1194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9570.17692.1 ID=prot_Ecto-sp9_F_contig9570.17692.1|Name=mRNA_Ecto-sp9_F_contig9570.17692.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=75bp
RGDSEGFFGWAVLQMKGGAARSSQISANALPDVGGGSVGVCRCSRRTYQS
GEQQQGVWPVGGRSRSPLGNGAKTP
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