prot_Ecto-sp9_F_contig957.17690.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig957.17690.1
Unique Nameprot_Ecto-sp9_F_contig957.17690.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length296
Homology
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BLAST of mRNA_Ecto-sp9_F_contig957.17690.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG6_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 8.120e-120
Identity = 265/279 (94.98%), Postives = 269/279 (96.42%), Query Frame = 0 
Query:    1 MRQGGHSKRPREGNSALYTAVCRGDADLVADLLKPKRHGQRDGSAAAAEGAPAALDLEEISRGSTALHAACGTGQSRIVAMLIEAGADPNTVRPKDGYSPLLIAVEVRERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILELLVEGAAAPACDDGFLARKLLLQLSDARGYQPLHCAVRDGARARDTVLTLLEVGAEVDGGALPALPPPPTPLMLAALKVLPAIAKVLIEAGANVNVR 279
            MRQGGHSKRPREGNSALYTAVCRGDADLVA+LLKPK HGQRDGSAAAA GAPAALDLEE+SRGSTALHA CGTGQSRIVAMLIEAGADPNTVRPKDGYSPLLIAVEVRER  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILELLVEGAAA ACDDG LARKLLLQLSDARG+QPLHCAVRDGARARDTVL LL +GAEVDGGALPALPPPPTPLMLAALKVLPAIAKVLIEAGANVN R
Sbjct:    1 MRQGGHSKRPREGNSALYTAVCRGDADLVAELLKPKPHGQRDGSAAAAAGAPAALDLEELSRGSTALHAGCGTGQSRIVAMLIEAGADPNTVRPKDGYSPLLIAVEVRERDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILELLVEGAAAAACDDGLLARKLLLQLSDARGHQPLHCAVRDGARARDTVLALLGMGAEVDGGALPALPPPPTPLMLAALKVLPAIAKVLIEAGANVNAR 279
[Close]
BLAST of mRNA_Ecto-sp9_F_contig957.17690.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F6_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 5.300e-55
Identity = 95/105 (90.48%), Postives = 98/105 (93.33%), Query Frame = 0 
Query:    1 MRQGGHSKRPREGNSALYTAVCRGDADLVADLLKPKRHGQRDGSAAAAEGAPAALDLEEISRGSTALHAACGTGQSRIVAMLIEAGADPNTVRPKDGYSPLLIAV 105
            MRQGGHSK PREGNSALYTAVCRGDA+L A+LLK KRHGQ DGSAAAA GAPAALDLEE+SRGSTALHAACGT QSRIVAMLIEAGADPNTV PKDGYSPLLIAV
Sbjct:    1 MRQGGHSKPPREGNSALYTAVCRGDANLAAELLKSKRHGQPDGSAAAAAGAPAALDLEELSRGSTALHAACGTWQSRIVAMLIEAGADPNTVSPKDGYSPLLIAV 105
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig957.17690.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.120e-12094.98protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.300e-5590.48protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 131..146
score: 39.89
coord: 265..279
score: 38.51
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 62..91
e-value: 6.2E-4
score: 29.1
coord: 164..193
e-value: 100.0
score: 11.8
coord: 96..125
e-value: 0.059
score: 22.5
coord: 210..241
e-value: 39.0
score: 13.1
coord: 130..159
e-value: 0.42
score: 19.7
coord: 249..278
e-value: 18.0
score: 14.2
coord: 12..42
e-value: 360.0
score: 8.3
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 252..278
e-value: 0.0092
score: 16.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 96..128
score: 9.511
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 130..156
score: 10.953
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 252..281
score: 9.003
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 210..240
score: 9.271
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 62..94
score: 12.209
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 161..296
e-value: 4.5E-20
score: 74.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 6..160
e-value: 4.7E-29
score: 103.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 13..292
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 102..188
e-value: 2.8E-9
score: 37.4
coord: 12..91
e-value: 8.3E-8
score: 32.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 62..296
score: 46.076
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 11..194
coord: 131..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig957contigEcto-sp9_F_contig957:21177..22097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig957.17690.1mRNA_Ecto-sp9_F_contig957.17690.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig957 21177..22097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig957.17690.1 ID=prot_Ecto-sp9_F_contig957.17690.1|Name=mRNA_Ecto-sp9_F_contig957.17690.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=296bp
MRQGGHSKRPREGNSALYTAVCRGDADLVADLLKPKRHGQRDGSAAAAEG
APAALDLEEISRGSTALHAACGTGQSRIVAMLIEAGADPNTVRPKDGYSP
LLIAVEVRERGIVKALLEAKADPELSSHAEGIAPLHMAASQGMTEIVLDL
LRAGANQLQPTLGKLLAPIHYASFSGCVDILELLVEGAAAPACDDGFLAR
KLLLQLSDARGYQPLHCAVRDGARARDTVLTLLEVGAEVDGGALPALPPP
PTPLMLAALKVLPAIAKVLIEAGANVNVRQVDGETVLHISARMCDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom