prot_Ecto-sp9_F_contig957.17688.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig957.17688.1
Unique Nameprot_Ecto-sp9_F_contig957.17688.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length466
Homology
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BLAST of mRNA_Ecto-sp9_F_contig957.17688.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG4_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 3.520e-137
Identity = 436/451 (96.67%), Postives = 440/451 (97.56%), Query Frame = 0 
Query:   12 MVGVGRAPGFASSLVRCSGAHNAWLTPKEANLRSLATVAERRRGGSRGRGDGHAGRGPVARAKRTGRTQHRNADAPRFQPFGRAGGEGSKVAERLYEDFGINSLKKYSPEATDERKRVLTWLEGTVRMSSRAIADMVEQEPRIAEQETGAISARLAXXXXXXXXXXXXXXXXXHRRPSVLCRSVDDSMEPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRSTEVLDTKVAFFCQEMGATLEDVRAVLMTSPNFLLVSIDLMLAPRVAALKDAGVEVSFSAHWNDLAFGPRGEAFDFWVRRQASR 462
            MVGVGRAPGFASSLVRC GAHNAWLTPKEANLRSLATVAERRRGGSRGRGDGHAGRG VA+AKR GR QHRNADAPRFQPFGRAGGEGSKVAERLYEDFGIN+LKKYSPEATDERKRVLTWLEG VRMSSRAIADMVEQEPRIAEQETGAISARL XXXXXXXXXXXXXXXXX   PSVLCRSVDDSMEPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRSTEVLD KVAFFCQEMGATLEDVRAVLMTSPNFLL+SIDLMLAPRVA LKDAGV+VSFSAHWNDLAFGPRGEAFDFWVRRQASR
Sbjct:    1 MVGVGRAPGFASSLVRCGGAHNAWLTPKEANLRSLATVAERRRGGSRGRGDGHAGRGSVAQAKRAGRPQHRNADAPRFQPFGRAGGEGSKVAERLYEDFGINNLKKYSPEATDERKRVLTWLEGKVRMSSRAIADMVEQEPRIAEQETGAISARLXXXXXXXXXXXXXXXXXXXXXPSVLCRSVDDSMEPKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRSTEVLDAKVAFFCQEMGATLEDVRAVLMTSPNFLLISIDLMLAPRVATLKDAGVKVSFSAHWNDLAFGPRGEAFDFWVRRQASR 451
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig957.17688.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized3.520e-13796.67protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVG4... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 292..324
e-value: 0.43
score: 19.6
coord: 255..287
e-value: 0.39
score: 19.8
coord: 366..397
e-value: 2.1
score: 17.4
coord: 218..249
e-value: 4.9
score: 16.1
coord: 145..176
e-value: 2800.0
score: 0.4
coord: 181..213
e-value: 1.8E-4
score: 30.8
coord: 402..433
e-value: 130.0
score: 10.9
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 291..437
e-value: 5.9E-14
score: 51.7
coord: 138..281
e-value: 1.4E-19
score: 70.2
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 322..436
e-value: 3.3E-11
score: 44.8
coord: 161..321
e-value: 3.2E-32
score: 113.8
NoneNo IPR availablePANTHERPTHR13068:SF131coord: 348..429
coord: 248..331
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 248..331
NoneNo IPR availablePANTHERPTHR13068:SF131coord: 166..250
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 166..250
coord: 348..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig957contigEcto-sp9_F_contig957:8689..11247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig957.17688.1mRNA_Ecto-sp9_F_contig957.17688.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig957 8426..11247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig957.17688.1 ID=prot_Ecto-sp9_F_contig957.17688.1|Name=mRNA_Ecto-sp9_F_contig957.17688.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=466bp
MFLTGNSARSLMVGVGRAPGFASSLVRCSGAHNAWLTPKEANLRSLATVA
ERRRGGSRGRGDGHAGRGPVARAKRTGRTQHRNADAPRFQPFGRAGGEGS
KVAERLYEDFGINSLKKYSPEATDERKRVLTWLEGTVRMSSRAIADMVEQ
EPRIAEQETGAISARLAWLKERLRLSDEQIRSLVHRRPSVLCRSVDDSME
PKVQWLQEKLGLSADEVATMVSSAPNVLTISIEGSMAPKLDWLSRRLILS
NEELAAVVTTCPQVLTSSIEGALEPRLRWLHTNLQIGASVLRERVLSYPW
LLNLSEKDKLVPTFDFLKTELLLDEAEIRKTLFRNPRMFLTPMRQTFDST
KKWLCTSVGLGEEEAVKVLTKDARLLLRSTEVLDTKVAFFCQEMGATLED
VRAVLMTSPNFLLVSIDLMLAPRVAALKDAGVEVSFSAHWNDLAFGPRGE
AFDFWVRRQASRSRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf