prot_Ecto-sp9_F_contig956.17677.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig956.17677.1
Unique Nameprot_Ecto-sp9_F_contig956.17677.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length132
Homology
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BLAST of mRNA_Ecto-sp9_F_contig956.17677.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P1_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.730e-33
Identity = 105/128 (82.03%), Postives = 105/128 (82.03%), Query Frame = 0 
Query:    4 SDDTVVPYDGDVVVTCAAPATTPTLTXXXXXXXXXXXXSTGGGVTAPTTDDGTATRMPVEGTHAPGTAAPVVARGEDGDGDGXXXXXTVVIAASVAGGVALLAILGAVAYKLKXXXXXXXSYDDLVGA 131
            SDDTVVPYDGDVVVTCA PATTP   XXXXXXXXXXXX   GG      DDGTATRMPVEGTHAPGT APVVA GEDGDGD XXXXX       VAGGVALLAILGAVAYKLKXXXXXXXSYDDLVGA
Sbjct:  238 SDDTVVPYDGDVVVTCA-PATTPXXXXXXXXXXXXXXXXXDGG-----NDDGTATRMPVEGTHAPGTVAPVVAGGEDGDGDXXXXXXXXXXXXXVAGGVALLAILGAVAYKLKXXXXXXXSYDDLVGA 359
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BLAST of mRNA_Ecto-sp9_F_contig956.17677.1 vs.
Match: F5/8 (type C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK7_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.910e-20
Identity = 75/129 (58.14%), Postives = 80/129 (62.02%), Query Frame = 0 
Query:    4 SDDTVVPYDGDVVVTCAAPATTPTLTXXXXXXXXXXXXSTGGGVTAPTTDD-GTATRMPVEGTHAPGTAAPVVARGEDGDGDGXXXXXTVVIAASVAGGVALLAILGAVAYKLKXXXXXXXSYDDLVGA 131
            SD +++PYDG V VTCA PATTPTLT                    PTTDD GTATRMPVEGTH+PGTAAPVV  GE      XXXXX       VAGGVALLAILGAVAYK K       SYDD +GA
Sbjct:  515 SDGSIMPYDGAVAVTCA-PATTPTLTPATSP--------------VPTTDDDGTATRMPVEGTHSPGTAAPVVPGGEXXXXXXXXXXXXXX----VAGGVALLAILGAVAYKFKDPPP---SYDDAMGA 621
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig956.17677.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.730e-3382.03protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
F5/81.910e-2058.14type C domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..91
NoneNo IPR availableTMHMMTMhelixcoord: 91..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig956contigEcto-sp9_F_contig956:128..523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig956.17677.1mRNA_Ecto-sp9_F_contig956.17677.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig956 128..523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig956.17677.1 ID=prot_Ecto-sp9_F_contig956.17677.1|Name=mRNA_Ecto-sp9_F_contig956.17677.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=132bp
IARSDDTVVPYDGDVVVTCAAPATTPTLTPATSPAPTPTTTSTGGGVTAP
TTDDGTATRMPVEGTHAPGTAAPVVARGEDGDGDGGGGSDTVVIAASVAG
GVALLAILGAVAYKLKKNPPPPPSYDDLVGA*
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