prot_Ecto-sp9_F_contig9541.17667.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9541.17667.1
Unique Nameprot_Ecto-sp9_F_contig9541.17667.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length208
Homology
BLAST of mRNA_Ecto-sp9_F_contig9541.17667.1 vs.
Match: DUF4168 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4P7_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 7.640e-133
Identity = 196/201 (97.51%), Postives = 199/201 (99.00%), Query Frame = 0
Query:    7 AGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPLPDPVVVGAEGDAAAPTALRSKAEQRRIVNRGQQVKTPRAGPPPDKKMLFAKSLREIEALRFRQRRRLMKEVGSDDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKLEKRGRA 207
            AGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPLPDPVVVGAEGDAAAPT+ RSKAE+RRIVNRGQQVKTPRAGPPPDKKMLFAKSLREIEALR RQRRRLMKEVGS+DLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKLEKRGRA
Sbjct:    2 AGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPLPDPVVVGAEGDAAAPTSPRSKAERRRIVNRGQQVKTPRAGPPPDKKMLFAKSLREIEALRSRQRRRLMKEVGSNDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKLEKRGRA 202          
BLAST of mRNA_Ecto-sp9_F_contig9541.17667.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ45_9STRA)

HSP 1 Score: 145 bits (366), Expect = 4.670e-39
Identity = 86/195 (44.10%), Postives = 119/195 (61.03%), Query Frame = 0
Query:    7 AGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPLPDPVVVGAEGDAAAPTALRSKAEQRRIVNRGQQVKTPRAGPPPDKKMLFAKSLREIEALRFRQRRRLMKEVGSDDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKL 201
            AG II S  L+ +R+NQL+ ++ + K L  RV  QAYLYRV A+L G K  P+ D +   A+G        RS        +    +        P K  LFAKSLRE+E+LR  QRRRLM+ +  D+LP GLC   M R++SP +R+ C+ FP+ A ++V+ANGL  EEFNRL  R++ N++YR++VLR V KL
Sbjct:  119 AGRIITSCDLSISRFNQLTKLVAQDKQLASRVNRQAYLYRVGAELHGDKFLPVED-LREAAKGG-------RSGRGNGEFSDGANGLSAMALLGQPKKLRLFAKSLREVESLRMEQRRRLMETLEVDELPQGLCMTRMARVSSPIVRRACEQFPLQAAAVVRANGLRTEEFNRLLQRAQKNLVYRYRVLRLVHKL 305          
BLAST of mRNA_Ecto-sp9_F_contig9541.17667.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPY0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.010e-13
Identity = 54/196 (27.55%), Postives = 104/196 (53.06%), Query Frame = 0
Query:   15 GLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPL--PDPVVVGAEGDAAAPTALRSKAEQRRIVNRGQQVKTPRA-----GPPPDKKMLFAKSLREIEALRFRQRRRLMKEVGSDDLPS-GLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKLE 202
            GL+ + +N +S  +    DL+ +V HQAYLYR+ + +  TK  P+  P   + G+    ++ T  RS  +   +    +Q   PR      G   D   LFA   ++++ L+ +QR +L+  +  D+ P   +C   +    S  +R  C++FP  AE++V++ G++   F +L A+  ++ ++RW++ R +R+L+
Sbjct:  138 GLSVSEFNTISRTVAGSPDLKQKVLHQAYLYRLASKI-DTKRDPIIAPSQTIGGSSDSTSSSTITRSPPDDTLLKAYNKQ--NPRGSTALDGATADSIKLFASLAKQVQHLQQQQRAQLVSTLKIDEFPDLPICDDRVLPFMSQEVRDLCRAFPAKAEALVRSYGVDYSSFEKLLAKVDSDPIFRWRLKRQMRQLD 330          
BLAST of mRNA_Ecto-sp9_F_contig9541.17667.1 vs.
Match: DUF4168 (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D076_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 6.570e-13
Identity = 42/97 (43.30%), Postives = 55/97 (56.70%), Query Frame = 0
Query:  102 PDKKMLFAKSLREIEALRFRQRRRLMKEVGSDDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCV 198
            P +  LFAKSLREIEALR  Q   L +E   D LP G   P +  I + +++  C  FPV AE I + NG E  EFN L  ++  N  +RW+V R +
Sbjct:  276 PHRLALFAKSLREIEALRAEQNHLLKQEFHVDTLPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKAEKNPFFRWRVERLM 372          
BLAST of mRNA_Ecto-sp9_F_contig9541.17667.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRM5_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.120e-12
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 0
Query:  102 PDKKMLFAKSLREIEALRFRQRRRLMKEVGSDDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRC 197
            P +  LFAKSLREIEALR  Q   L +E   D LP G   P +  I + +++  C  FPV AE I + NG E  EFN L  ++  N  +RW+   C
Sbjct:  205 PHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWRRQAC 300          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9541.17667.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
DUF41687.640e-13397.51domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Uncharacterized4.670e-3944.10protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.010e-1327.55protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
DUF41686.570e-1343.30domain-containing protein n=1 Tax=Nannochloropsis ... [more]
Uncharacterized4.120e-1242.71protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025433Domain of unknown function DUF4168PFAMPF13767DUF4168coord: 108..193
e-value: 1.3E-8
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9541contigEcto-sp9_F_contig9541:138..2883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9541.17667.1mRNA_Ecto-sp9_F_contig9541.17667.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9541 138..2883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9541.17667.1 ID=prot_Ecto-sp9_F_contig9541.17667.1|Name=mRNA_Ecto-sp9_F_contig9541.17667.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=208bp
MNNITKAGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNAD
LRGTKIRPLPDPVVVGAEGDAAAPTALRSKAEQRRIVNRGQQVKTPRAGP
PPDKKMLFAKSLREIEALRFRQRRRLMKEVGSDDLPSGLCRPEMGRIASP
RIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRK
LEKRGRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025433DUF4168