prot_Ecto-sp9_F_contig9525.17654.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9525.17654.1
Unique Nameprot_Ecto-sp9_F_contig9525.17654.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length106
Homology
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD73_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.090e-55
Identity = 100/105 (95.24%), Postives = 101/105 (96.19%), Query Frame = 0
Query:    1 MVSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSVGV 105
            MVSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATA GQYGTDYLI KFKRPSFIILSIASVVALSAFLMGINGLYDILHP AGGDEE+GICS GV
Sbjct:  401 MVSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAMGQYGTDYLINKFKRPSFIILSIASVVALSAFLMGINGLYDILHPTAGGDEEDGICSAGV 505          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ1_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 1.370e-34
Identity = 74/105 (70.48%), Postives = 76/105 (72.38%), Query Frame = 0
Query:    1 MVSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSVGV 105
            MVSSSTSAVMILFTSFTATTSFVVFGLLTF                            KRPSFIILSIASVVALSAFLMGINGLYDI+HP AGG+EENGICSVGV
Sbjct:    1 MVSSSTSAVMILFTSFTATTSFVVFGLLTF----------------------------KRPSFIILSIASVVALSAFLMGINGLYDIIHPTAGGEEENGICSVGV 77          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV47_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 6.890e-31
Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = 0
Query:    1 MVSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSVG 104
            MV+S+TSAVMIL+TSFTATTSF+VFGLL  DYA+ LF +GL ATA GQ   ++L++K+KR SFI+LSI +VVALSA +MG + LY+ + P    +   G CSVG
Sbjct:    1 MVASATSAVMILYTSFTATTSFMVFGLLEEDYAIALFVVGLAATAVGQVVVNHLVKKYKRTSFIVLSIGAVVALSAVMMGGHSLYNFMFPNPDEEGGGGFCSVG 104          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFF2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.390e-25
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSVG 104
            V+S+TSA MILFTSFTATTSF+VFGLL  DYA  +F +GL+AT  GQ G +YL+++++R S II+SI +VVALSA LMG   LY +  P    DE  G C+ G
Sbjct:  121 VASATSACMILFTSFTATTSFMVFGLLRRDYAQLMFVVGLLATFVGQVGVNYLVQRYQRSSLIIVSIGAVVALSALLMGGQSLYFLAFPRQD-DESGGFCAAG 222          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AWA8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.410e-24
Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSV 103
            VSS++SA MILFTSFTATTSFVVFGLL  DYA+  F +G +AT  GQ G  YL++KF+R S+I  SI  VV LSAFLM I  LY +      G    G+C  
Sbjct:   15 VSSASSACMILFTSFTATTSFVVFGLLIPDYAMICFTIGFLATLVGQIGLFYLMKKFQRNSYIAFSIGFVVLLSAFLMTIQSLYSMAEEPRKGHGSGGVCGT 116          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.150e-24
Identity = 59/103 (57.28%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSVG 104
            V+S+TSA MILFTSFTATTSF+VFGLL  DYA  +F +GL+AT  GQ G +YL+++++R S II+SI +VVALSA LMG   LY +  P    DE  G C+ G
Sbjct:  421 VASATSACMILFTSFTATTSFMVFGLLRRDYAQLMFVVGLLATFVGQVGVNYLVQRYQRSSLIIVSIGAVVALSALLMGGQSLYFLAFPRQD-DESGGFCAAG 522          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCQ0_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.500e-23
Identity = 53/79 (67.09%), Postives = 68/79 (86.08%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMG 80
            V+S+TSA MIL+TSFTAT+SF+ FG++ +DYA+ LFF+GLVATAAGQ G +YLI+K+KR S IILSI SVV+LS  +MG
Sbjct:  167 VASATSACMILYTSFTATSSFIAFGMVKYDYAIFLFFVGLVATAAGQLGVNYLIKKYKRQSLIILSIGSVVSLSTVMMG 245          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAC9_CYCTE)

HSP 1 Score: 91.7 bits (226), Expect = 1.260e-21
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGIC 101
            VSS++SA MILFTSFTATTSFVVFGLL  DYA     +G VAT AGQ G +YL+++++R S+I  SI  VV LSAFLM I  L  +   ++      G+C
Sbjct:   29 VSSASSACMILFTSFTATTSFVVFGLLVPDYAAVCLVIGFVATYAGQIGLNYLMKRYQRNSYIAFSIGGVVLLSAFLMTIQSLVSMAESSS--HHSGGVC 126          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X1_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.540e-21
Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILH-PAAGGDEENGICSV 103
            V++++SA MILFTSFTATTSF +F LL +DYAV LF +G + T+ GQYG  YL++++ R S+II SI +VV LSA LMG+  +  +   P +GG     IC  
Sbjct:  420 VAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDA 522          
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP42_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.230e-20
Identity = 54/103 (52.43%), Postives = 69/103 (66.99%), Query Frame = 0
Query:    2 VSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYGTDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGICSVG 104
            VSS+TSA MI++TSFTATTSF VFGLL FDYA+    +G+  T  GQ G   LI+K KR S II SIA+VV LS  LMG++    ++ P+   +EE   C+ G
Sbjct:  407 VSSATSACMIMYTSFTATTSFFVFGLLKFDYAILFTIMGVTVTYFGQQGITMLIKKLKRDSLIIFSIAAVVGLSTMLMGLHSAISLMTPSH--EEEASFCAAG 507          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9525.17654.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.090e-5595.24protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.370e-3470.48protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.890e-3159.62protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.390e-2557.28protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical3.410e-2455.88protein n=1 Tax=Minutocellus polymorphus TaxID=265... [more]
Uncharacterized6.150e-2457.28protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.500e-2367.09protein (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
Hypothetical1.260e-2154.00protein n=1 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]
Uncharacterized2.540e-2150.49protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Hypothetical2.230e-2052.43protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14255ATP-DEPENDENT PROTEASE CEREBLONcoord: 2..101
NoneNo IPR availablePANTHERPTHR14255:SF3SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 5-RELATEDcoord: 2..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..62
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9525contigEcto-sp9_F_contig9525:2696..4460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9525.17654.1mRNA_Ecto-sp9_F_contig9525.17654.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9525 2693..4472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9525.17654.1 ID=prot_Ecto-sp9_F_contig9525.17654.1|Name=mRNA_Ecto-sp9_F_contig9525.17654.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=106bp
MVSSSTSAVMILFTSFTATTSFVVFGLLTFDYAVPLFFLGLVATAAGQYG
TDYLIEKFKRPSFIILSIASVVALSAFLMGINGLYDILHPAAGGDEENGI
CSVGV*
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