prot_Ecto-sp9_F_contig9463.17610.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9463.17610.1
Unique Nameprot_Ecto-sp9_F_contig9463.17610.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length60
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9463.17610.1 vs.
Match: Similar (to Isochorismate Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF2_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.160e-26
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 
Query:    1 GCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASILASCFTTPG 58
            GCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASILASCFTTPG
Sbjct: 2519 GCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASILASCFTTPG 2576
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BLAST of mRNA_Ecto-sp9_F_contig9463.17610.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW3_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.470e-26
Identity = 57/58 (98.28%), Postives = 57/58 (98.28%), Query Frame = 0 
Query:    1 GCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASILASCFTTPG 58
            GCAAFVVKVSVVGGLSRSARLCGLAR LGAEAVLSSAFETGVGLAHASILASCFTTPG
Sbjct: 1009 GCAAFVVKVSVVGGLSRSARLCGLARHLGAEAVLSSAFETGVGLAHASILASCFTTPG 1066
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9463.17610.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Similar1.160e-26100.00to Isochorismate Synthase n=1 Tax=Ectocarpus silic... [more]
Uncharacterized5.470e-2698.28protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036849Enolase-like, C-terminal domain superfamilyGENE3D3.20.20.120coord: 1..58
e-value: 7.7E-11
score: 43.9
IPR036849Enolase-like, C-terminal domain superfamilySUPERFAMILY51604Enolase C-terminal domain-likecoord: 2..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9463contigEcto-sp9_F_contig9463:136..315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9463.17610.1mRNA_Ecto-sp9_F_contig9463.17610.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9463 136..315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9463.17610.1 ID=prot_Ecto-sp9_F_contig9463.17610.1|Name=mRNA_Ecto-sp9_F_contig9463.17610.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=60bp
GCAAFVVKVSVVGGLSRSARLCGLARRLGAEAVLSSAFETGVGLAHASIL
ASCFTTPGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036849Enolase-like_C_sf