prot_Ecto-sp9_F_contig945.17600.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig945.17600.1
Unique Nameprot_Ecto-sp9_F_contig945.17600.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length837
Homology
BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 1206 bits (3119), Expect = 0.000e+0
Identity = 679/838 (81.03%), Postives = 709/838 (84.61%), Query Frame = 0
Query:    1 MVRRRQRRRDHASPAASLASLAAYAILLYFSISPTVAAAASVAHAPRRQKLQPLDETPSGXXXXXIGGKGWNTARNSWIDADEGELEAEEQNARFSNRDGEGACSSNRGGDG-KGVGSNGKLWDGQAWGVPAPALEPSCHLLDRPPDAYPGAIKTVGGTMPESRHDSSWCAGDEDCVLPPATGAGNKEEAVRGGGVGGSQEGTXXXXXXXXXXXXXXXXXXXXXRRGESSIPGDAGRVPDDEARALSSGEGPPRRDGRFTTTAAASLADFTAAEPKEQQSRLVDGYATIATAAYPQSKPPSTTEQSSLPTAARPTVAAERPPQQEQRGPLVKGQGANTNTRDGDTGGVKHPGATAVVHGDRRTGATDEGARAEEPTPGRWNRHANVGPTGGSKGKXXXXXXXXXXXXXXXXXSEKRGGEGRVLETIIVGGKAWPSWRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGMISDSEEGEDGNGDQGVVPGDDDGEAPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGRGGWSGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRGALAPAAVSSKAIAAGGVVKGKQLPPDEWPEWLAARRGTAAAAVAEVEAGKEVARAATIRPAAGAVPTEEDAIAAAPAVVEGREANDGREVQRRGDNERTATATEARPSAASRGNAGVGVGQTIGPHQQQQPLGDASRTRPAAIGLQFGDGCVN-GGGGDSSTEGPRPLGSEDGDALSFVGXXXXXXAGSCCPSEDNSIDVRAGDFSSRRVSLSAEQPPAMTAGYRVS 836
            MVRRR+     ASPAASLASLAAYAILL FSISPTVAAAA+VAHAPRRQKLQP+ ETP G     IGGKGW+T RNSWIDADEGELEAEE+NAR  N D EGA S+N GGDG KGVG NGKLWDGQA G PA ALEPSC+LLDRP DAYPG +KT+GGT+P    DSSWCAGDEDCV+PPATGAG                  XXXXXXXXXXXXXXX        GE SI GDAGRVPD EARALS GEGPPRRDGRFTTTAAASLADFT  EPKEQQSRLVDGYATIATAAYPQS+PP+TTEQSSLP AARPTVAAERPPQQEQRGPLVKGQGAN NTRD DTGGVKHPGATAVVHG+RRTGA+DEGARAEEPTPGRWNR+ANVGPTGGSK +                 SE RGGEG  LET IVGGK+WPSWRTFACILLLSAL L TFLRG MPHWLPFFGG RRQRWA DLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPG+ISDSEEGEDGN  QGVVPGDDDGEAPLMWDRRPKPDDYL+FHPVLGVVPAGVVRAWGGDG GGW GVRAEAAGAR GGTNGGT GKGCGCSSKSSSPRGA APAA+SSKA A GGVVKGKQLPPDEWPEWLAARR TAAAAVA+VEAGK+   AATIRPAA AVPTE DAI  APA V+GRE NDGREVQRRGDNERTATATEARP+AAS G   VGVGQT+ PH QQQ LG+ASRTRPAAIGLQF DGCVN GGGGDSSTEGPRPLGS+ GDALSFVG      AGS CPSEDN+IDVRAGDFS+RRVSLSAEQPPAMTAGYRVS
Sbjct:    1 MVRRRRXXXXXASPAASLASLAAYAILLSFSISPTVAAAAAVAHAPRRQKLQPIHETPPGGGDGGIGGKGWHTVRNSWIDADEGELEAEERNARLINGDSEGAFSANGGGDGNKGVGRNGKLWDGQASGAPALALEPSCNLLDRPSDAYPGVVKTIGGTVPGILQDSSWCAGDEDCVVPPATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAACL-GEPSISGDAGRVPDVEARALSGGEGPPRRDGRFTTTAAASLADFTTTEPKEQQSRLVDGYATIATAAYPQSRPPTTTEQSSLP-AARPTVAAERPPQQEQRGPLVKGQGANINTRDRDTGGVKHPGATAVVHGERRTGASDEGARAEEPTPGRWNRNANVGPTGGSKEQGRREIELSAGTGGRGRRSENRGGEGGGLETGIVGGKSWPSWRTFACILLLSALGLSTFLRGSMPHWLPFFGGGRRQRWAKDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGLISDSEEGEDGNDTQGVVPGDDDGEAPLMWDRRPKPDDYLIFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARAGGTNGGTXGKGCGCSSKSSSPRGARAPAAMSSKATAVGGVVKGKQLPPDEWPEWLAARRATAAAAVADVEAGKKGVGAATIRPAAEAVPTEADAITTAPAAVQGREVNDGREVQRRGDNERTATATEARPAAASGGKTVVGVGQTVDPHHQQQALGNASRTRPAAIGLQFEDGCVNDGGGGDSSTEGPRPLGSDGGDALSFVGGGGGS-AGSYCPSEDNNIDVRAGDFSARRVSLSAEQPPAMTAGYRVS 835          
BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0
Identity = 559/645 (86.67%), Postives = 576/645 (89.30%), Query Frame = 0
Query:    1 MVRRRQRRRDHASPAASLASLAAYAILLYFSISPTVAAAASV-AHAPRRQKLQPLDETPSGXXXXXIGGKGWNTARNSWIDADEGELEAEEQNARFSNRDGEGACSSNRGGDG-KGVGSNGKLWDGQAWGVPAPALEPSCHLLDRPPDAYPGAIKTVGGTMPESRHDSSWCAGDEDCVLPPATGAGNKEEAVRGGGVGGSQEGTXXXXXXXXXXXXXXXXXXXXXRRGESSIPGDAGRVPDDEARALSSGEGPPRRDGRFTTTAAASLADFTAAEPKEQQSRLVDGYATIATAAYPQSKPPSTTEQSSLPTAARPTVAAERPPQQEQRGPLVKGQGANTNTRDGDTGGVKHPGATAVVHGDRRTGATDEGARAEEPTPGRWNRHANVGPTGGSKGKXXXXXXXXXXXXXXXXXSEKRGGEGRVLETIIVGGKAWPSWRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGMISDSEEGEDGNGDQGVVPGDDDGEAPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGRGGWSGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRGALAPAAVSSKAIAAGGVVKGKQLPPDEWPEWLA 643
            MVRRR++RRDHASPAASLASL AYAILL FSISPTVAAA    AHAPRRQKLQP+DETPSG XXXXIGGKGW+TAR+SWIDADEGELEAEE+N+R  N DGEGACS+N GG+G KGV SNGK WDGQAWGVPAPALEPSCHL DR  DAYPGA+KT+GGT+P+   DSSWCAG EDCVLPPATGAGNK+EAVRGGGVGGSQEGT       XXXXXXXXXX     RGESSIPGDAGRVPDDEARA SSGEGPPRRDGRFTTTAAASLADFT A PKEQQSRLVDGYATIATAAYPQS+PPSTTEQSSLPT ARPTVA ERPPQQEQRGPLVKGQGANTNTRD DTGGVKHPGATAVVHGD RTGATDEGARAEEPTPGRWNRHA VGPTGGSKGK         XXXXXXXX         VLET IVGGKAWPSWR FACILLLSALVLGTFLRG +PHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLP +ISDSEEGEDGNGDQGVVPGDDDGE PLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDG GGW GVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPR ALAPAAVSSKAIA  GVVKGKQLPPDEWPEWLA
Sbjct:    1 MVRRRRKRRDHASPAASLASLTAYAILLSFSISPTVAAAXXXXAHAPRRQKLQPIDETPSGGXXXXIGGKGWHTARSSWIDADEGELEAEERNSRCINGDGEGACSANGGGNGNKGVRSNGKPWDGQAWGVPAPALEPSCHLSDRSSDAYPGAVKTIGGTVPDILQDSSWCAGGEDCVLPPATGAGNKKEAVRGGGVGGSQEGTGSCIDAAXXXXXXXXXXEAAACRGESSIPGDAGRVPDDEARASSSGEGPPRRDGRFTTTAAASLADFTTAGPKEQQSRLVDGYATIATAAYPQSRPPSTTEQSSLPTEARPTVATERPPQQEQRGPLVKGQGANTNTRDRDTGGVKHPGATAVVHGDGRTGATDEGARAEEPTPGRWNRHAKVGPTGGSKGKGRRERELPAXXXXXXXXXXXXXXXXGVLETAIVGGKAWPSWRAFACILLLSALVLGTFLRGSIPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPDLISDSEEGEDGNGDQGVVPGDDDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRSALAPAAVSSKAIAVAGVVKGKQLPPDEWPEWLA 645          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized0.000e+081.03protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized0.000e+086.67protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 454..836
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..434
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 435..453
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..39
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig945contigEcto-sp9_F_contig945:16858..19820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig945.17600.1mRNA_Ecto-sp9_F_contig945.17600.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig945 16807..21204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig945.17600.1 ID=prot_Ecto-sp9_F_contig945.17600.1|Name=mRNA_Ecto-sp9_F_contig945.17600.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=837bp
MVRRRQRRRDHASPAASLASLAAYAILLYFSISPTVAAAASVAHAPRRQK
LQPLDETPSGGGGGGIGGKGWNTARNSWIDADEGELEAEEQNARFSNRDG
EGACSSNRGGDGKGVGSNGKLWDGQAWGVPAPALEPSCHLLDRPPDAYPG
AIKTVGGTMPESRHDSSWCAGDEDCVLPPATGAGNKEEAVRGGGVGGSQE
GTGSCIAAAGAAAGGGNSGEAAARRGESSIPGDAGRVPDDEARALSSGEG
PPRRDGRFTTTAAASLADFTAAEPKEQQSRLVDGYATIATAAYPQSKPPS
TTEQSSLPTAARPTVAAERPPQQEQRGPLVKGQGANTNTRDGDTGGVKHP
GATAVVHGDRRTGATDEGARAEEPTPGRWNRHANVGPTGGSKGKGRRERE
LPAGTGGGGSGSEKRGGEGRVLETIIVGGKAWPSWRTFACILLLSALVLG
TFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSG
DPVDDSDLPGMISDSEEGEDGNGDQGVVPGDDDGEAPLMWDRRPKPDDYL
VFHPVLGVVPAGVVRAWGGDGRGGWSGVRAEAAGARVGGTNGGTGGKGCG
CSSKSSSPRGALAPAAVSSKAIAAGGVVKGKQLPPDEWPEWLAARRGTAA
AAVAEVEAGKEVARAATIRPAAGAVPTEEDAIAAAPAVVEGREANDGREV
QRRGDNERTATATEARPSAASRGNAGVGVGQTIGPHQQQQPLGDASRTRP
AAIGLQFGDGCVNGGGGDSSTEGPRPLGSEDGDALSFVGGGGGGSAGSCC
PSEDNSIDVRAGDFSSRRVSLSAEQPPAMTAGYRVS*
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