prot_Ecto-sp9_F_contig942.17571.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig942.17571.1
Unique Nameprot_Ecto-sp9_F_contig942.17571.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length384
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig942.17571.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL1_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 5.860e-129
Identity = 198/206 (96.12%), Postives = 203/206 (98.54%), Query Frame = 0 
Query:  178 MSVKDAAEAKLKKQETQLVVVEHATRICSVLCNEMLGDLIDVIGEVQADARQRKFNRQQHVKSTAKELLDKLGGALTFHAERKSSAQGTMAATAGQIAHNRKFFGPNAGATKQAESSYAEMEGYAQDSSDKILAMVDQTRKMLAKMEVDLSREDMDGLMEAESKHILQGREDLTNPNGDKIKPDTLRNALRDARVEVSSTGECRLM 383
            MSVKDAAEAKLKKQ+TQLVVVEHATRICS+LCNEM GDLIDVIGEVQADARQRKFNRQQHVKSTAKELLDKLGGALTFHAERKSSAQGTMAATAGQIAHNRKFFGPNAGATKQAESSY EMEGYAQDSSDKILA+VDQTRK+LAKMEVDLSREDMDGLME ESKHILQGREDLTNPNGDKIKPDTLRNALRDARVEVSSTGECRL+
Sbjct:    1 MSVKDAAEAKLKKQKTQLVVVEHATRICSLLCNEMFGDLIDVIGEVQADARQRKFNRQQHVKSTAKELLDKLGGALTFHAERKSSAQGTMAATAGQIAHNRKFFGPNAGATKQAESSYVEMEGYAQDSSDKILAIVDQTRKLLAKMEVDLSREDMDGLME-ESKHILQGREDLTNPNGDKIKPDTLRNALRDARVEVSSTGECRLI 205
[Close]
BLAST of mRNA_Ecto-sp9_F_contig942.17571.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL75_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.160e-43
Identity = 82/92 (89.13%), Postives = 88/92 (95.65%), Query Frame = 0 
Query:  292 ESSYAEMEGYAQDSSDKILAMVDQTRKMLAKMEVDLSREDMDGLMEAESKHILQGREDLTNPNGDKIKPDTLRNALRDARVEVSSTGECRLM 383
            +SSYAEMEGYAQDSSDKILA+VDQTRK+LAKME+DLSREDMD LME ESKHILQGREDL NPNGD+IKPDTLRNALRDARVEVSSTG+CR M
Sbjct:   12 QSSYAEMEGYAQDSSDKILAIVDQTRKLLAKMEMDLSREDMDELME-ESKHILQGREDLINPNGDEIKPDTLRNALRDARVEVSSTGDCRPM 102
[Close]
BLAST of mRNA_Ecto-sp9_F_contig942.17571.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC5_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.810e-15
Identity = 45/49 (91.84%), Postives = 45/49 (91.84%), Query Frame = 0 
Query:  115 VETTKDEVQTAADAVEDATNAVIGCHLNSTGSKEDALRSLVSSLQQRQG 163
            VETTKDEVQ AADAVEDATNAVIG HLNSTGSKEDALRSLVSSLQQ  G
Sbjct:    4 VETTKDEVQAAADAVEDATNAVIGDHLNSTGSKEDALRSLVSSLQQTLG 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig942.17571.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized5.860e-12996.12protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.160e-4389.13protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.810e-1591.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableCOILSCoilCoilcoord: 174..201
NoneNo IPR availableCOILSCoilCoilcoord: 115..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig942contigEcto-sp9_F_contig942:655..8670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig942.17571.1mRNA_Ecto-sp9_F_contig942.17571.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig942 655..8670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig942.17571.1 ID=prot_Ecto-sp9_F_contig942.17571.1|Name=mRNA_Ecto-sp9_F_contig942.17571.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=384bp
MGLGGGGGATSFWQESTRTARKELPKAPSSPVQPQRGAGGPSCANDGPGG
GGQVVASEEASFWAALEVCREALKKVSFCRREEQWLELQREAVKERMDET
EEDDQMALTEHQTKVETTKDEVQTAADAVEDATNAVIGCHLNSTGSKEDA
LRSLVSSLQQRQGQLGGCDPLAARQRAMSVKDAAEAKLKKQETQLVVVEH
ATRICSVLCNEMLGDLIDVIGEVQADARQRKFNRQQHVKSTAKELLDKLG
GALTFHAERKSSAQGTMAATAGQIAHNRKFFGPNAGATKQAESSYAEMEG
YAQDSSDKILAMVDQTRKMLAKMEVDLSREDMDGLMEAESKHILQGREDL
TNPNGDKIKPDTLRNALRDARVEVSSTGECRLM*
back to top