prot_Ecto-sp9_F_contig941.17563.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig941.17563.1
Unique Nameprot_Ecto-sp9_F_contig941.17563.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.950e-19
Identity = 45/79 (56.96%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    5 DRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLRL------MPRELGDLSALLHLDLMRNRLSG 77
            DR  LVALF AT GA+W  N  WNT A L  W+G+EVND GRVVKL LR       +PR+LGDL AL+ L+L  N+L G
Sbjct:   12 DRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNLGVNKLEG 90          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 3.240e-16
Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLR------LMPRELGDLSALLHLDLMRNRLSG 77
            M   DRD LV L+RAT G +W + +NW+T ADL  WHG++VNDQGRVVKL LR       +P  LG L  L  L L  N+LSG
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKLSG 83          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.080e-15
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLR------LMPRELGDLSAL 65
            M   DRD LVAL+RAT G +W +++NW+T ADL  WHG++VNDQGRVVKL LR       +P  LG L+ L
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANL 71          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX36_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.110e-15
Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKL 50
            M   DRD LVAL+ AT G  W+ N+NWNTGA LS WHG+ VNDQGRVV L
Sbjct:    1 MASTDRDALVALYNATEGGRWSTNRNWNTGAPLSQWHGVHVNDQGRVVAL 50          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C2_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 3.850e-14
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKL 50
            M   DRD LVA++RAT G  W+ ++NW+T +DL  WHG+ VNDQGRVVKL
Sbjct:    1 MAQTDRDALVAMYRATGGEKWSTSQNWDTDSDLKTWHGVNVNDQGRVVKL 50          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK2_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 4.740e-14
Identity = 40/71 (56.34%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLRL------MPRELGDLSAL 65
            M   DR  LVAL+ AT GA W +N+NW T A LS WHG+EVN QGRVVKL L        +P+ELG LS L
Sbjct:   71 MAQTDRKALVALYNATGGAEWKNNQNWTTSAALSQWHGVEVNTQGRVVKLSLGWNNLRGPIPKELGALSRL 141          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFJ9_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.430e-13
Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCL------RLMPRELGDLSAL 65
            M   DR+ LVAL+ A  GA W +N+NWNT A LS WHG+EVN QGRVV L L        +P ELG+L  L
Sbjct:   25 MAQTDREALVALYTAIGGAKWRNNRNWNTSAALSQWHGVEVNSQGRVVNLFLWDNNLQGRIPTELGNLHML 95          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.580e-13
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLRL------MPRELGDLSALLHLDL 70
            M   DRD LVALFR+T GASW+   NW+T A+++ W G++VND+GRVVKL L+       +P +LG+LS L  LDL
Sbjct:    1 MALTDRDALVALFRSTGGASWDKKDNWDTAAEIATWSGVQVNDEGRVVKLRLKSNNLRGPIPPQLGNLSFLESLDL 76          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.990e-13
Identity = 41/86 (47.67%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLR------LMPRELGDLSALLHLDLMRNRLSGPIP 80
            M   DR  LVALFR+  G  W+ NKNW+TGADLS W+G+ V   GRVV+L L        +P  LG L+ L +L    N+L+G IP
Sbjct:    1 MASEDRAALVALFRSAGGTRWHRNKNWDTGADLSQWYGVHVKHDGRVVELWLSSNNLEGTIPEALGVLTELKYLRFNHNKLTGSIP 86          
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.090e-13
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    1 MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKLCLRL------MPRELGDL 62
            M   DRDVLVAL+ AT G +W +  NW+T ADLSDWHG++ +DQGRVVKL L        +P +LG+L
Sbjct:    1 MAPTDRDVLVALYNATDGPNWKNKTNWDTNADLSDWHGVKADDQGRVVKLSLSANKLRGSIPPQLGNL 68          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig941.17563.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.950e-1956.96protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Hypothetical3.240e-1653.01leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Uncharacterized1.080e-1554.93protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.110e-1566.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.850e-1460.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical4.740e-1456.34leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Hypothetical1.430e-1353.52leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
LRR-GTPase1.580e-1352.63of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]
Hypothetical1.990e-1347.67leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
LRR-GTPase2.090e-1354.41of the ROCO family n=1 Tax=Ectocarpus siliculosus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 137..150
score: 54.54
coord: 158..171
score: 46.01
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 103..202
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 40..137
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 40..137
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 103..202
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..203
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 132..171
e-value: 2.3E-7
score: 30.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..203
e-value: 9.8E-53
score: 181.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig941contigEcto-sp9_F_contig941:3273..16425 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig941.17563.1mRNA_Ecto-sp9_F_contig941.17563.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig941 3133..16425 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig941.17563.1 ID=prot_Ecto-sp9_F_contig941.17563.1|Name=mRNA_Ecto-sp9_F_contig941.17563.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=203bp
MTHADRDVLVALFRATSGASWNDNKNWNTGADLSDWHGIEVNDQGRVVKL
CLRLMPRELGDLSALLHLDLMRNRLSGPIPLELGNLSALLHLDLNDNKCE
GPIPPELGDLSALWHLDFSGNQLSGPIPPRLRNLSALLHLDLSANQLSGF
IPPELGDLSALWHLNLSGNKISGSIPPELGKLIVLECLNISGNGLTGSIP
PEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf