prot_Ecto-sp9_F_contig9395.17552.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9395.17552.1
Unique Nameprot_Ecto-sp9_F_contig9395.17552.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length255
Homology
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: PolyA_pol (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK47_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 1.130e-132
Identity = 243/254 (95.67%), Postives = 246/254 (96.85%), Query Frame = 0
Query:    1 MKHKAKKGKLVSAAHSVVADSLKLKSKEAKNVEDILELLKTFRPLANAYVATTTSPGTSAVATKMEVEVDETDREGRATFSRLSAGLAVRQAKQLWPTCVDLCCAVEMCEPQQQAPPSXXXXXXXXXXXXXXGTISACPADHLEQTVEAAXXXXXXXXXXXXXXXXXXDEPFREGGKERAVIYKYAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLRATL 254
            MKHKAKKGKLVSAAHSVVADSLKLKSKEAKNVEDIL+LLKTFRPLA+AYVA  TSPGTSAVATKMEVEVD TDREGRATFSRLS GLAVRQAKQLWPTCVDLCCAVEMCEPQQQAP  XXXXXXXXXXXXXXGTI ACPADHLEQTVEAAXXXXXXXXXXXXXXXXXXDEPFREGGKERAVIYKYAGLRKAVA MGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEG+REQCVAFLRATL
Sbjct:  454 MKHKAKKGKLVSAAHSVVADSLKLKSKEAKNVEDILDLLKTFRPLADAYVAYPTSPGTSAVATKMEVEVDGTDREGRATFSRLSVGLAVRQAKQLWPTCVDLCCAVEMCEPQQQAPXXXXXXXXXXXXXXXXGTIFACPADHLEQTVEAAXXXXXXXXXXXXXXXXXXDEPFREGGKERAVIYKYAGLRKAVAGMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGTREQCVAFLRATL 707          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: tRNA (nucleotidyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG75_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.050e-11
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 0
Query:  175 GGKERAVIYKYAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLRA 252
            G    A   KYA LR  VA +GL+R W++ P+  G ELM  L LP GP +    AK   +QL HP G+R++C+A LR+
Sbjct:  421 GAPVAATEAKYAALRAFVADVGLDRVWELKPILDGKELMTLLSLPPGPGVRVMSAKVVEYQLAHPAGTRDECLAHLRS 498          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: tRNA (nucleotidyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GII9_ACACA)

HSP 1 Score: 64.7 bits (156), Expect = 2.830e-8
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:  190 KAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLR 251
            K    + L+  WD+ PL  G ELM  L LP GP I + + ++ +WQL HP+G+ E+C AFLR
Sbjct:  487 KVEKELHLDGVWDLKPLINGQELMQLLGLPPGPAIRQHLEREMAWQLSHPDGTLEECAAFLR 548          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FY89_VITBC)

HSP 1 Score: 63.9 bits (154), Expect = 3.600e-8
Identity = 64/264 (24.24%), Postives = 105/264 (39.77%), Query Frame = 0
Query:    1 MKHKAKKGKLVSAAHSVVADSLKLKSKEAKNVEDILELLKTFRPLANAYV--ATTTSPGTSAVATKMEV-------EVDETDREGRAT---FSRLSAGLAVRQAKQLWPTCVDLCCAVEMCEPQQQAPPSXXXXXXXXXXXXXXGTISACPADHLEQTVEAAXXXXXXXXXXXXXXXXXXDEPFREGGKERAVIYKYAGLRKAVASMGLERAWDMVPLARGNELMAEL-QLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLR 251
            ++++ KKGK  S    ++ D LKL  ++A+ V+ IL +   ++ L   +        P T A A            E D T  EG +    + R+  GL +R+A  LW   + +  A  +                        G ++     H + T                        P       + VI  Y  +++AV   GL+  WD  P   GN + + L +LPKGP+  + M +Q  W L HPEG+ ++C AF++
Sbjct:  113 LQYEGKKGKASSVVIYLLGDRLKLPKRDAERVDLILSVALEYQRLVGDWGEGGVPPPPKTHAGAPSXXXXXQEGADEADGTTHEGSSASQRYRRVDLGLILRKAGHLWNASLMVAMAGAI------------------------GRVTPSSPSHTQPTTPPLSGPP----------------PAVPLHSSKHVISSYRAVKEAVEWFGLDGVWDKGPPLDGNAVKSVLPKLPKGPKFKEVMDEQVVWMLGHPEGTADECRAFIK 336          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: Hypothetical (protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2YZM9_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 1.410e-7
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 0
Query:  170 EPFREGGKE--RAVIYKYAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFL 250
            +P   G +E  +A ++      KAVA + L++AW + PL  G ELM+ L   +GP IGK + +  +WQL HP+GS E+C AFL
Sbjct:  177 DPCSPGEEELAKAALFVSRVEEKAVA-LKLDKAWQIKPLINGKELMSVLNA-RGPIIGKAVGEMVNWQLAHPDGSVEECKAFL 257          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: PolyA_pol (domain-containing protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7QNK6_GLOTA)

HSP 1 Score: 60.5 bits (145), Expect = 7.330e-7
Identity = 25/68 (36.76%), Postives = 41/68 (60.29%), Query Frame = 0
Query:  185 YAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLRA 252
            Y      +  + L+ A DM P+  G +++AEL    GP  G+ +A+   WQL+HP+G++E+C  +LRA
Sbjct:  439 YNAFMSRIDELALQSAADMKPILTGRDVVAELNAKPGPWTGQALARVVEWQLDHPQGTKEECATWLRA 506          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8FMQ7_FOMPI)

HSP 1 Score: 59.7 bits (143), Expect = 1.320e-6
Identity = 25/71 (35.21%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  182 IYKYAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLRA 252
            + +Y  L   +  +GL+      PL  G E++A L+LP GP +     + A W+ EHP+G++++CVA+L+A
Sbjct:  439 VTQYNNLVTKIEELGLDTLLSARPLLNGKEILAALELPPGPWVHAVQERVAEWRFEHPDGTKDECVAWLKA 509          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WXW7_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.740e-6
Identity = 23/76 (30.26%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  178 ERAVIYKYAGLRKAVAS-MGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLRA 252
            + A++ ++  L + +A  + L+  W + P+  G  +MAE+ +P+GPE+G+   +Q  W L++P G+R+  +  L A
Sbjct:   47 DEAILDRFQSLLETIAQRLQLDTCWKVRPMLDGKTIMAEVGIPRGPEVGEYNQEQVRWSLQYPSGTRDDAIQHLLA 122          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) TaxID=578454 RepID=G8BHT5_CANPC)

HSP 1 Score: 58.2 bits (139), Expect = 4.250e-6
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = 0
Query:  179 RAVIYKYAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLRA 252
            + VI+KY  L   + S  L +   M PL  GN+L+  LQ   GP +   M     WQL+HP+G++E+C+ F+++
Sbjct:  444 QGVIHKYESLYSTIDSSDLSQVHLMKPLLDGNQLVKYLQRKPGPWMKPAMDNVLVWQLDHPQGTKEECIEFIKS 517          
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3X8R2_9AGAM)

HSP 1 Score: 57.4 bits (137), Expect = 7.940e-6
Identity = 31/75 (41.33%), Postives = 39/75 (52.00%), Query Frame = 0
Query:  177 KERAVIYKYAGLRKAVASMGLERAWDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFLR 251
            K  A I  Y    + V  + L  A D  P+  G  L   L+L  GP  GK +A    WQL HPEG+REQCV +L+
Sbjct:  457 KASACIGVYNNFVRRVEELDLVSAIDAKPILDGRSLAQTLELKPGPWTGKVLADVVKWQLGHPEGTREQCVEWLK 531          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9395.17552.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
PolyA_pol1.130e-13295.67domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
tRNA5.050e-1144.87nucleotidyltransferase n=1 Tax=Achlya hypogyna Tax... [more]
tRNA2.830e-845.16nucleotidyltransferase n=1 Tax=Acanthamoeba castel... [more]
Uncharacterized3.600e-824.24protein n=2 Tax=Vitrella brassicaformis TaxID=1169... [more]
Hypothetical1.410e-742.17protein n=1 Tax=Chloropicon laureae TaxID=464258 R... [more]
PolyA_pol7.330e-736.76domain-containing protein n=1 Tax=Gloeophyllum tra... [more]
Uncharacterized1.320e-635.21protein n=1 Tax=Fomitopsis pinicola (strain FP-585... [more]
Hypothetical1.740e-630.26protein n=1 Tax=Craspedostauros australis TaxID=14... [more]
Uncharacterized4.250e-636.49protein n=1 Tax=Candida parapsilosis (strain CDC 3... [more]
Uncharacterized7.940e-641.33protein n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=71... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13734TRNA-NUCLEOTIDYLTRANSFERASEcoord: 2..252
NoneNo IPR availableSUPERFAMILY81891Poly A polymerase C-terminal region-likecoord: 196..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9395contigEcto-sp9_F_contig9395:109..2633 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9395.17552.1mRNA_Ecto-sp9_F_contig9395.17552.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9395 10..3967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9395.17552.1 ID=prot_Ecto-sp9_F_contig9395.17552.1|Name=mRNA_Ecto-sp9_F_contig9395.17552.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=255bp
MKHKAKKGKLVSAAHSVVADSLKLKSKEAKNVEDILELLKTFRPLANAYV
ATTTSPGTSAVATKMEVEVDETDREGRATFSRLSAGLAVRQAKQLWPTCV
DLCCAVEMCEPQQQAPPSPSPPPPPTMTTTTTGTISACPADHLEQTVEAA
AVTSSAGSGPPPAAGGEEDEPFREGGKERAVIYKYAGLRKAVASMGLERA
WDMVPLARGNELMAELQLPKGPEIGKQMAKQASWQLEHPEGSREQCVAFL
RATL*
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