prot_Ecto-sp9_F_contig9391.17551.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9391.17551.1
Unique Name	prot_Ecto-sp9_F_contig9391.17551.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	407

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9391.17551.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAS6_9PHAE)

HSP 1 Score: 632 bits (1630), Expect = 1.460e-211
Identity = 371/442 (83.94%), Postives = 378/442 (85.52%), Query Frame = 0

Query:    1 MSMRDSEISRLRRAYARSELSREDMKRCLRALAVQLREGEDRTGALMADREAALCKLNAKEEEFAKKEAVLEEGKARATAEVQQKEELVTSLQVENEALQAALERLRLDFQEERSLRLQSGPAAAXXXXXASKVRPSTPSRLGIFSRRRGLVSRNGGGTPAAAA----GEGGKPASRHGSVARPPATPSRHNRLLSGPSFLNHHIRSTPGRPGQGGRLAGGSGAIAAAATPGGVGWSSVHGGIGSRHSTAAAAAGGGSETWVQEGAGAQAVEGLPWILNTDQAWAGSARPPHEVLNHLLEELEGIKATSGGEKEEGSIAETAAFIEWSHRTGELQEVPPLETVDMPGERAFTEGCLK--------------------------------LLSAHAAAVLRKEPEQLTAREEARMAYAIGGGMYTIERLSAHLDALGAGLPTE 406
            MSMRDSEISRLRRAYARSELSRE+MKRCLRALAVQLREGEDRTGALMADREAALCKL+AKEEEFAKKEAVLEEGKARATAEVQQ+EELVTSLQVENEALQAALERLRLDFQEERSLRLQSGPAAAXXXXX SKVRPSTPSRLGIF RRRGL SR+GGGT         GE G+PASRHGSVARPPATPSRH+RLLSG SFLNHHIRSTPGRPGQGGRLAGGSGAIAAAATPGGVGWSSVH GIGSRHST AAAAGGGSETWVQE AGAQAVEGLPWILNTDQ           VLNHLLEELEGIKA SG EKEEGSIAETAAFIEWSHRTGELQE+PPLETVDMPGERAFTEGCLK                                LLSAHAAAVLRKEPEQLTAREE RMAYAIGGG YTIERLSAHLDALGAGLPTE
Sbjct: 1077 MSMRDSEISRLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALMADREAALCKLSAKEEEFAKKEAVLEEGKARATAEVQQQEELVTSLQVENEALQAALERLRLDFQEERSLRLQSGPAAAXXXXXXSKVRPSTPSRLGIF-RRRGLTSRDGGGTXXXXXXXXXGEEGQPASRHGSVARPPATPSRHSRLLSGSSFLNHHIRSTPGRPGQGGRLAGGSGAIAAAATPGGVGWSSVHRGIGSRHSTTAAAAGGGSETWVQEVAGAQAVEGLPWILNTDQ-----------VLNHLLEELEGIKAMSGEEKEEGSIAETAAFIEWSHRTGELQELPPLETVDMPGERAFTEGCLKTKHASQPVALGVHPSVFLIASAFLPVLSAPSQLLSAHAAAVLRKEPEQLTAREEVRMAYAIGGGTYTIERLSAHLDALGAGLPTE 1506

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9391.17551.1 vs.
Match: CRAL/TRIO (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK06_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 5.110e-125
Identity = 253/406 (62.32%), Postives = 259/406 (63.79%), Query Frame = 0

Query:    1 MSMRDSEISRLRRAYARSELSREDMKRCLRALAVQLREGEDRTGALMADREAALCKLNAKEEEFAKKEAVLEEGKARATAEVQQKEELVTSLQVENEALQAALERLRLDFQEERSLRLQSGPAAAXXXXXASKVRPSTPSRLGIFSRRRGLVSRNGGGTPAAAAGEGGKPASRHGSVARPPATPSRHNRLLSGPSFLNHHIRSTPGRPGQGGRLAGGSGAIAAAATPGGVGWSSVHGGIGSRHSTAAAAAGGGSETWVQEGAGAQAVEGLPWILNTDQAWAGSARPPHEVLNHLLEELEGIKATSGGEKEEGSIAETAAFIEWSHRTGELQEVPPLETVDMPGERAFTEGCLKLLSAHAAAVLRKEPEQLTAREEARMAYAIGGGMYTIERLSAHLDALGAGLPTE 406
            MSMRDSEISRLRRAYARSELSRE+MKRCLRALAVQLREGEDRTGAL+ADREAALCKLNAKEEEF KKEAVLEEGKARATAEVQQKEELVTSLQVENEALQAALERLRLDFQEERSLRLQSGPAAA     ASKV                                                                                                                        +TW      A+A           +AWA  ARPPHEVLNHLLEELEGIKA SGGE+EEGSIAETAAFIEWSHRTGELQEVPPLETVDMPGERAFTEGCLKLLSAHAAAVLRKEPEQLTAREEARMAYAIGGGMYTIERLSAHLDAL AGLPTE
Sbjct: 1017 MSMRDSEISRLRRAYARSELSREEMKRCLRALAVQLREGEDRTGALLADREAALCKLNAKEEEFTKKEAVLEEGKARATAEVQQKEELVTSLQVENEALQAALERLRLDFQEERSLRLQSGPAAAAAAA-ASKV------------------------------------------------------------------------------------------------------------------------DTWK-----ARAER---------EAWADGARPPHEVLNHLLEELEGIKAMSGGEQEEGSIAETAAFIEWSHRTGELQEVPPLETVDMPGERAFTEGCLKLLSAHAAAVLRKEPEQLTAREEARMAYAIGGGMYTIERLSAHLDALRAGLPTE 1287

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9391.17551.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9391.17551.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	1.460e-211	83.94	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
CRAL/TRIO	5.110e-125	62.32	domain containing protein n=1 Tax=Ectocarpus silic...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9391	contig	Ecto-sp9_F_contig9391:621..4682 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9391.17551.1	mRNA_Ecto-sp9_F_contig9391.17551.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9391 393..4683 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9391.17551.1 ID=prot_Ecto-sp9_F_contig9391.17551.1|Name=mRNA_Ecto-sp9_F_contig9391.17551.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=407bp
MSMRDSEISRLRRAYARSELSREDMKRCLRALAVQLREGEDRTGALMADR
EAALCKLNAKEEEFAKKEAVLEEGKARATAEVQQKEELVTSLQVENEALQ
AALERLRLDFQEERSLRLQSGPAAAAAAAAASKVRPSTPSRLGIFSRRRG
LVSRNGGGTPAAAAGEGGKPASRHGSVARPPATPSRHNRLLSGPSFLNHH
IRSTPGRPGQGGRLAGGSGAIAAAATPGGVGWSSVHGGIGSRHSTAAAAA
GGGSETWVQEGAGAQAVEGLPWILNTDQAWAGSARPPHEVLNHLLEELEG
IKATSGGEKEEGSIAETAAFIEWSHRTGELQEVPPLETVDMPGERAFTEG
CLKLLSAHAAAVLRKEPEQLTAREEARMAYAIGGGMYTIERLSAHLDALG
AGLPTE*