prot_Ecto-sp9_F_contig939.17546.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW4_9PHAE) HSP 1 Score: 501 bits (1290), Expect = 3.920e-178 Identity = 277/289 (95.85%), Postives = 280/289 (96.89%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKEPAARGAKRKADGEAATSASLDAXXXXXXXXXXXXXXXXXXXXXXXXTPTTGGMTKTLAATKPTR 289
M+FPGAAEDPEQRSFIDPVWLQQWGLGP+NALDYFALSPFYDKACNNEQCRMQ VDPREGLLNLTGLEFMLVELPPEMSFLPPG PAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYY+MEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKEPAARGAKRKADGEA TSASLDA XXXXXXXXXXXXXXXXXX TPTTGGMTKTLAATKPTR
Sbjct: 1 MEFPGAAEDPEQRSFIDPVWLQQWGLGPQNALDYFALSPFYDKACNNEQCRMQSVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEKYIDGDGEGKEGKEPAARGAKRKADGEAVTSASLDAAXXXXXXXXXXXXXXXXXX-----TPTTGGMTKTLAATKPTR 284
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X0_ECTSI) HSP 1 Score: 306 bits (784), Expect = 5.340e-103 Identity = 147/150 (98.00%), Postives = 148/150 (98.67%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVE 150
MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPG PAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYY+MEGVIYQAPTVQKLIKSRLNKFTHHLNNAF E
Sbjct: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGQPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYIMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFGE 150
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL9_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.010e-46 Identity = 97/216 (44.91%), Postives = 127/216 (58.80%), Query Frame = 0
Query: 8 EDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGV-DPREGLLNLTGLEFMLVELPPEMSFLP-PGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAE-EDRDAKAALKLSMDNILMGLVEKYIDGDGEG 220
ED Q SF D +WL+ + LGPE A+DYFALSPFYD+ NNE CRMQG+ D + +TG+E+++ ELPPE LP PG P PQPR L VIKKQ RKS + EV+ +YY+M+G IYQAP+ LI SRL K L+ +F L L ++ G YDW W EA + + A +A++ D IL+ LV +Y +GEG
Sbjct: 16 EDQTQLSFQDTMWLRSFYLGPETAIDYFALSPFYDRTSNNELCRMQGLTDHVAAMQTMTGIEYVVEELPPETDELPEPGAP----PQPRHLMVIKKQYRKSKTQAEVRGVYYIMDGTIYQAPSALALITSRLQKAAFMLSESFAALRALPA-HNARGAYDWPWNAEAXXXXXXXXXXXXXXXXXXQSQAALSAVRAGADAILLQLVSRYARSEGEG 226
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW25_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.590e-29 Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 0
Query: 14 SFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPP--EMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEA 172
SF+D W++ +GL N LDYFA SPFYD +CNNE RMQ + GLE ML ++PP E LP GH P LF++ KQ R S + V QA+YY+++ VIYQAP++Q+LI +RL+K T+HL NAF ++ K A+ S G + W + +A
Sbjct: 65 SFLDDNWIRAFGLSAHNVLDYFACSPFYDTSCNNEILRMQNL----------GLE-MLADMPPGIEYRLLPSGH-EPV------LFIVVKQERASKTVVRRQALYYILDKVIYQAPSLQRLIATRLSKSTNHLQNAFDQMVKAARYAPSQG-FTWHFDGDA 206
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4K5_HYAAE) HSP 1 Score: 120 bits (302), Expect = 3.850e-29 Identity = 77/219 (35.16%), Postives = 123/219 (56.16%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPREGLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLS----MDNILMGLVEKY 213
M+ A+D SF D VWLQ + L P+ L YFALSPFYD++CNNE+ +MQ G+D L NL G+E+ L+ P A P++L+VI+KQ R S + VE A+YY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +KD +E +E + + + + K + +D+IL+ L++K+
Sbjct: 1 MEVAAHADD-YNASFRDTVWLQSFPLNPQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGIEYELL-------------PNAAKQLPQQLYVIRKQRRSSRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLAAGVRFSPTEG---YAWDFSSKDKKEPVIPSEQLQLKLKQKYEKMEKQRENSARVDSILIQLMKKH 199
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NQQ4_PHYIT) HSP 1 Score: 117 bits (292), Expect = 8.040e-28 Identity = 74/211 (35.07%), Postives = 117/211 (55.45%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPREGLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLS----MDNILMGLVEKY 213
D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ G+D L NL G+E+ L+ P A P++LF+I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G +AW +KD +E +E + + + + K + +D+IL+ L++K+
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYELL-------------PNTAKQMPQQLFIIRKQRRSGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG---YAWDFSSKDKKEPVIPSEQLQLKLKQKYEKMEKQRENSARVDSILIQLMKKH 199
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RVG1_PHYPA) HSP 1 Score: 112 bits (281), Expect = 7.650e-27 Identity = 74/201 (36.82%), Postives = 104/201 (51.74%), Query Frame = 0
Query: 14 SFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPRE--GLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQKEAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEK 212
SF D +WL + L DYFALSPFYD+ CNNEQ RM+ + P + L TG+E++L E Q LFVI+KQ R P V QA YY+++G IYQAP + +I SR+ + +H+ NAF + S AKL G G + + D+Q K + V D K +++ D+IL G++ K
Sbjct: 9 SFRDQLWLSAYPLDRNLVFDYFALSPFYDRTCNNEQLRMEAIHPLDMTHLSKKTGMEYILHEA-----------------QEPHLFVIRKQKRDGPEKVSAQAAYYVLDGSIYQAPHLYNVIGSRVVRSLYHITNAFAQAS--AKLEKIGTG-----EADPADVQVKQSTTKFV-------DMKEVMRV--DSILAGIMRK 176
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JVT5_PHYPA) HSP 1 Score: 113 bits (282), Expect = 2.990e-26 Identity = 76/206 (36.89%), Postives = 106/206 (51.46%), Query Frame = 0
Query: 14 SFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPRE--GLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDWAWQK-----EAKDLQEKAEAAEGVGVAEEDRDAKAALKLSMDNILMGLVEK 212
SF D +WL + L DYFALSPFYD+ CNNEQ RM+ + P + L TG+E++L E Q LFVI+KQ R P V QA YY+++G IYQAP + +I SR+ + +H+ NAF + S AKL G G D +K + D+Q K + V D K +++ D+IL G++ K
Sbjct: 17 SFRDQLWLSAYPLDRNLVFDYFALSPFYDRTCNNEQLRMEAIHPLDMTHLSKKTGMEYILHEA-----------------QEPHLFVIRKQKRDGPEKVSAQAAYYVLDGSIYQAPHLYNVIGSRVVRSLYHITNAFAQAS--AKLEKIGTGTDNENEKVVGEADPADVQVKQSTTKFV-------DMKEVMRV--DSILAGIMRK 194
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L744_PLAHL) HSP 1 Score: 110 bits (275), Expect = 3.050e-26 Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 0
Query: 1 MDFPGAAEDPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQ--GVDPREGLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELS 152
M+ G +D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ G+D L NL G+E+ L+ P A P++L++I+KQ R + VE AIYY+++G +YQAP + ++ SRL K ++ +N AF L+
Sbjct: 1 MEVAGHVDD-YNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLGLDQ---LKNLRGVEYELL-------------PNAAKQLPQQLYIIRKQRRNGRTQVEPLAIYYVLDGTVYQAPNIHAMLTSRLKKCSYRINKAFHGLA 137
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Match: Mediator (of RNA polymerase II transcription subunit 6 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGT8_BRELC) HSP 1 Score: 110 bits (276), Expect = 3.540e-26 Identity = 61/158 (38.61%), Postives = 91/158 (57.59%), Query Frame = 0
Query: 9 DPEQRSFIDPVWLQQWGLGPENALDYFALSPFYDKACNNEQCRMQGVDPREGLLNLTGLEFMLVELPPEMSFLPPGHPAPAGPQPRRLFVIKKQVRKSPSSVEVQAIYYMMEGVIYQAPTVQKLIKSRLNKFTHHLNNAFVELSKLAKLRDSGGGYDW 166
D SF D VWLQ + L + L YFALSPFYD++CNNE+ +MQ + E L NL G+E+ L+ P A P++L++I+KQ R + VE A+YY+++G +YQAP + ++ SRL K ++ +N AF L+ + + G Y W
Sbjct: 8 DDYNASFRDTVWLQSFPLNAQTVLHYFALSPFYDRSCNNERLKMQRLG-LEQLKNLRGVEYELL-------------PNAAKQLPQQLYIIRKQRRNGRTQVEPLAVYYVLDGTVYQAPNIHAMLTSRLKKCSYRVNKAFHGLAAGVRFSPTEG-YAW 150 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig939.17546.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig939.17546.1 ID=prot_Ecto-sp9_F_contig939.17546.1|Name=mRNA_Ecto-sp9_F_contig939.17546.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=290bpback to top |