prot_Ecto-sp9_F_contig9369.17529.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9369.17529.1
Unique Name	prot_Ecto-sp9_F_contig9369.17529.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	164

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 7.370e-111
Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0

Query:    1 QARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPPFLGAITMGLGAIFSFTAVFFWEDGDGTAMSDESKAVELGLAPLAAHPGAPPRAYYPQSPHPV 163
            +ARLCI LSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGG+GFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPP LGAITMGLGAIFSFTAVFFWEDGD TAM  E K VELGLAP+AAHPGAPPRAYYPQSPHPV
Sbjct:   13 KARLCIALSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGVGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPPLLGAITMGLGAIFSFTAVFFWEDGDCTAMPHEGKTVELGLAPIAAHPGAPPRAYYPQSPHPV 175

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 1.090e-52
Identity = 91/180 (50.56%), Postives = 113/180 (62.78%), Query Frame = 0

Query:    2 ARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSF-----------DGSSEGTTALWYALPPFLGAITMGLGAIFSFTAVFFWEDGDGTAM-------------------SDESKAVELGLAPLAAHPGAP 151
            AR C +LSIVIH IS ++ G ++ WQRNA F  F +GGL+LC Y++YMY IG +GFA+CA+FD+ AVLRWIT DD I + DD +           + SS+ T  LW A+PPFLGAI MGLGAIF+FTA+F W+ G GTA+                     ESK  ELGLAP  AHP  P
Sbjct:   39 ARGCAILSIVIHAISFYLGGGFFVWQRNACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHVPVAPQPTFDFTKQPQSQQESKTAELGLAPPTAHPRTP 218

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.400e-28
Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 0

Query:    1 QARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSF-----------DGSSEG--TTALWYALPPFLGAITMGLGAIFSFTAVFFWEDGDGTAMSDESKAVELGLAPLAAHPGAPPRA----YYPQSPH 161
            QAR C + +I++H  +L V GW W WQ  A+   F + G++LC+YD+  Y  GGI FAV A+FD+  ++ WI   +N+   DD +           DG  E      LW+AL PFLGA+++GLGA+FSFT++ FW+D    A +         +A   AH  AP       Y PQ+ H
Sbjct:    8 QARACAICAIIVHVGALLVFGWLWVWQWIASVLAFIMCGVLLCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNLQ--DDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPAAA---------MAVTTAHVPAPQNTVSATYQPQNEH 174

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Uncharacterized	7.370e-111	93.87	protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8...	[more]
Uncharacterized	1.090e-52	50.56	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.400e-28	38.20	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 5..24
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 55..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 74..92
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 123..163
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..48
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..54
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 93..122
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..29
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..4
None	No IPR available	TMHMM	TMhelix		coord: 50..72
None	No IPR available	TMHMM	TMhelix		coord: 5..24
None	No IPR available	TMHMM	TMhelix		coord: 92..114
None	No IPR available	TMHMM	TMhelix		coord: 28..45

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9369	contig	Ecto-sp9_F_contig9369:2304..4162 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9369.17529.1	mRNA_Ecto-sp9_F_contig9369.17529.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9369 2304..4162 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9369.17529.1 ID=prot_Ecto-sp9_F_contig9369.17529.1|Name=mRNA_Ecto-sp9_F_contig9369.17529.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=164bp
QARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMY
AIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALP
PFLGAITMGLGAIFSFTAVFFWEDGDGTAMSDESKAVELGLAPLAAHPGA
PPRAYYPQSPHPV*