prot_Ecto-sp9_F_contig936.17523.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig936.17523.1
Unique Name	prot_Ecto-sp9_F_contig936.17523.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	884

Homology

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ2_9PHAE)

HSP 1 Score: 1083 bits (2800), Expect = 0.000e+0
Identity = 758/841 (90.13%), Postives = 767/841 (91.20%), Query Frame = 0

Query:    1 MPAKRRPTPTKAEGSSDNAKNGVKKAXXXXXXXXXXXXXXXXXXXXXIAAAPHTSREKGKGAFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMVESSEDGSXXXXXXXX--TGAKAKANKSKHVGGKRQEEDSSEGEESEQELQSFMEAFPGMSSDEEEGEDGTGLGGAGMVXXXXXXXXXXXXXDEDEEDAGLMDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFAPGERKAVSTGAGVPDKDAPEANEAGAAGAADEMDVDFSGSDEDEXXXXXXXRAKKEAKRDARNNAKAQKAVGAEIKEVNSDEEEDGGEQSRPAAKKSKPDPTAAANGHSTPGRGRGRG--AARGDGGGRGGXXXXXXXXXXXXXXXXXXXXXXXRSSGGYASAGRNPGGFGGGRSFGGGR 837
            MP KRRPTPTK EG S+N KNGV KA XXXXXXXXXXXXXXXXXXXX   A H SREKGKGAFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEM ESSEDGSXXXXXX    TGAKAKA+KSKH GGK        GEESEQELQSFMEAFPGMSSDEEEGEDGTGL      XXXXXXXXXXXX DEDEED GLM IERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEE E GQEEEVVPPQVLKERIESVI+VLSEFQ +RDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKS TGG+IVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFAPGERKAVSTGAGVPDKDAPEANEAGA GAA+EMDVD+S SDEDE       RAKKEA  DA+NNAKAQ+AVGAEIKEVNSDE       SRPAAKKSKPDPTA ANGHSTPGRG GR   AARGDGGGR  XX           XXXXXXXXXXRSSGGYASAGRNPGGFGGGRSFGGGR
Sbjct:    1 MPPKRRPTPTKVEGISENEKNGVNKAAXXXXXXXXXXXXXXXXXXXXXXXA-HASREKGKGAFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMEESSEDGSXXXXXXAKQVTGAKAKADKSKHSGGKXXXXXXXXGEESEQELQSFMEAFPGMSSDEEEGEDGTGLXXXXXXXXXXXXXXXXXXSDEDEEDGGLMHIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEAEGGQEEEVVPPQVLKERIESVIEVLSEFQERRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSATGGIIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFAPGERKAVSTGAGVPDKDAPEANEAGAVGAANEMDVDYSASDEDEDSKTKRKRAKKEAXXDAKNNAKAQEAVGAEIKEVNSDEXXXXXXXSRPAAKKSKPDPTATANGHSTPGRGTGRDRRAARGDGGGRXXXXSAGSLGRGTSRXXXXXXXXXXRSSGGYASAGRNPGGFGGGRSFGGGR 840

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0G2_ECTSI)

HSP 1 Score: 805 bits (2079), Expect = 2.500e-283
Identity = 571/599 (95.33%), Postives = 574/599 (95.83%), Query Frame = 0

Query:    1 MPAKRRPTPTKAEGSSDNAKNGVKKAXXXXXXXXXXXXXXXXXXXXXIAAAPHTSREKGKGAFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMVESSEDGSXXXXXXXX-TGAKAKANKSKHVGGKRQEEDSSEGEESEQELQSFMEAFPGMSSDEEEGEDGTGLGGAGMVXXXXXXXXXXXXXDEDEEDAGLMDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQV 598
            MPAKRRPTPTKAEGSSDNAKNGVKKAXXXXXXXXXXXXXXXXXXXXX     HTSREKGKGAFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEM ESSEDGS  XXX    TGAKAKANKSKH GGKRQ      GEESEQELQSFMEAFPGMSSDEEEGEDGTGLGGAGMV  XXXXXXXXXX DEDEED GLMDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVI+VLS+FQ KRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKS TGGVIVYSTCSVSVAENEQ+
Sbjct:    1 MPAKRRPTPTKAEGSSDNAKNGVKKAXXXXXXXXXXXXXXXXXXXXXXXXXAHTSREKGKGAFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDEMEESSEDGSEEXXXAEQVTGAKAKANKSKHGGGKRQXXXXXXGEESEQELQSFMEAFPGMSSDEEEGEDGTGLGGAGMVSDXXXXXXXXXXSDEDEEDGGLMDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIEVLSQFQEKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSATGGVIVYSTCSVSVAENEQL 599

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: Ribosomal (RNA methyltransferase nop2like protein put n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI73_9STRA)

HSP 1 Score: 605 bits (1560), Expect = 1.340e-203
Identity = 330/506 (65.22%), Postives = 388/506 (76.68%), Query Frame = 0

Query:  178 KRQEEDSSEGEESEQELQSFMEAFPGMSSDEEEGEDGTGLGGAGMVXXXXXXXXXXXXXDEDEEDAG----------LMDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGE-----GDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFAPGERKAV 666
            KR E+D SE E+ + E +  + AFPGM SDEE+ +DG   GGA                 +DE+  G           +DIE++++ LD                 L+RD+ E R AL L    E     G+ EEGE G   E  PP VLKERI  V++VLS+F+++R+  +SRA+Y+E+LA+D+ EYYG LREL+D+FL MFSPAE VEF+EASD+PRP+VIR NTLKTRRKDLAEALIKRGVSLEPVA WSKVGLK+TES +PIGATPEYLAGHYMLQSAASMCPVMAL PQ  ER+LD+S+APGGK++YI QLMRNTG V+ANDL+  RQ+ATVANLHRLGVRNALVCCHDGR +P    G DR LLDAPCSGLGVIS D SVK+QRT KD+ R++HLQKELLCAAVD VSA S TGGV+VYSTCSVSV ENEQVIEYIL+KRYVKLVPTGL+ GRPGF+R+QERRFHPS++LTRRFYPHVHNMDGFFVAKLKKFA GERK+V
Sbjct:   66 KRLEDDLSEDEDGDAEPERLLSAFPGMDSDEEQ-DDG---GGAAFSDANKSWLKPVVTGSDDEDGEGDEXXXXVADDELDIEKEARLLDAXXXXXXXXXXXXXXXALQRDLEEARLALKLPVTEEAGDSAGEEEEGEAGARAESAPPTVLKERIADVVEVLSDFKARRNARVSRAEYVEQLARDMAEYYGCLRELIDLFLRMFSPAEAVEFMEASDRPRPVVIRTNTLKTRRKDLAEALIKRGVSLEPVAAWSKVGLKVTESTVPIGATPEYLAGHYMLQSAASMCPVMALDPQPNERILDLSSAPGGKTSYICQLMRNTGAVVANDLKAGRQKATVANLHRLGVRNALVCCHDGRALPGLIGGFDRALLDAPCSGLGVISHDPSVKVQRTLKDVQRTAHLQKELLCAAVDCVSAASATGGVVVYSTCSVSVEENEQVIEYILKKRYVKLVPTGLEHGRPGFTRYQERRFHPSLSLTRRFYPHVHNMDGFFVAKLKKFANGERKSV 567

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1V6_THAPS)

HSP 1 Score: 522 bits (1345), Expect = 3.080e-174
Identity = 272/418 (65.07%), Postives = 341/418 (81.58%), Query Frame = 0

Query:  246 MDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIPFK---GVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGG-VIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA 659
            M++ERQSK +D   A M AE ++EA+  + R + + + ++  +P  E   E+     E  VVPP  L+ RIE V++VL++F+++R+P  SR+DY+ERLA+D+ E +G+L+ELVD FL MF P EC+EFLEASDKPRPLV+R NTLK RRKDLA AL+KRGV L+P+A WSKVGLKI ES +PIGATPEYLAGHYMLQSAASMCPVMAL PQ G+RVLDMSAAPGGK++Y++QLM+N GVVIANDL+P+RQ+ATVANLHRLGVRN + C +DGRKI  +     DR+LLDAPCSGLGVISRD SVK+QRT  D+ R +HLQKELL AA+DA++AKS  GG  +VYSTCSV+VAENE+V+ Y+L KR VKLV TGLDFG+PGF+RF+ +RFHPS+ LTRRFYPHVHNMDGF+VAK++K +
Sbjct:   29 MEVERQSKLID---AEMLAE-QEEAEVEMRRTIAQ-QTSVYHLPTAEEIAED-----ENRVVPPSELRARIEDVLEVLADFKTRREPGRSRSDYIERLAQDMAELFGYLQELVDYFLSMFGPNECLEFLEASDKPRPLVVRVNTLKARRKDLAAALMKRGVRLDPLAPWSKVGLKIYESTVPIGATPEYLAGHYMLQSAASMCPVMALGPQPGDRVLDMSAAPGGKTSYVSQLMKNKGVVIANDLKPERQKATVANLHRLGVRNVVTCVYDGRKIGNQLRNSFDRILLDAPCSGLGVISRDPSVKVQRTIPDVQRCAHLQKELLLAAIDALNAKSKKGGGCMVYSTCSVAVAENEEVVNYLLSKRDVKLVETGLDFGKPGFTRFEHKRFHPSLALTRRFYPHVHNMDGFYVAKIQKLS 436

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHE3_GLOUD)

HSP 1 Score: 519 bits (1337), Expect = 2.540e-173
Identity = 253/363 (69.70%), Postives = 312/363 (85.95%), Query Frame = 0

Query:  299 EEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA 659
            EE  EEE   P  + +RI+ +I+VL++F+ +R+P  SR DY+E LAKD+  Y+G+ REL+DMF+ MFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ  ERVLDM+ APGGK+TYIAQLM+NTG +IANDL+ QR +ATVANLHRLGV+N  V C+DGRK+P  FKG DRVLLDAPC+G+GVI+RD S+K Q+T KD+ R +HLQKELL AA+DAV AKS TGG I+YSTCSV V ENE V++Y L+KR VKLV TGLD G+PGF+R+Q++RFHPS+NLTRRFYPHVHNMDGF+VAK KKFA
Sbjct:   17 EEMDEEEASDPAEIYQRIKDIIEVLAQFKDRREPGRSRIDYVETLAKDISNYFGYNRELIDMFMKMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQLNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKTEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVEENESVVDYALRKRNVKLVDTGLDHGKPGFTRYQQQRFHPSVNLTRRFYPHVHNMDGFYVAKFKKFA 379

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL24_PYTOL)

HSP 1 Score: 524 bits (1349), Expect = 4.010e-173
Identity = 268/416 (64.42%), Postives = 337/416 (81.01%), Query Frame = 0

Query:  246 MDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA 659
            +DIER+S+ LD+ AAR +AE  +E +  +  +     E   L         E EEG+ E+   P  + +R++ VI+VLS F+ +R+P  SR +Y++ LA+DL  Y+G+ R+L+DMFL MFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+SMC VMALAPQ  ERVLDM+ APGGK+TYIAQLM+NTG VIANDL+ QR +ATVANLHRLGV+N  V C+DGRK+P  FKG DRVLLDAPC+GLGVI+RD S+K Q+T KD+LR +HLQKELL AA+DAV AKS+TGG IVYSTCS+ V ENE V++Y L+KR VKLV TGLD G+ GF+R+Q++RFHPS++LTRRFYPHVHNMDGF+VAK KK+A
Sbjct:  110 LDIERKSRLLDEAAAREEAEAEEEMRLNIANN-----ERYHLPT-------EEEEGEGEDATDPAEIYQRMKDVIEVLSHFKERREPGRSRVEYMDTLAQDLANYFGYNRDLIDMFLKMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLATALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSMCSVMALAPQLNERVLDMACAPGGKTTYIAQLMKNTGTVIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPTLFKGFDRVLLDAPCTGLGVIARDPSIKTQKTEKDVLRLAHLQKELLLAAIDAVDAKSSTGGYIVYSTCSIMVEENEAVVDYALKKRCVKLVETGLDHGKAGFTRYQQQRFHPSVSLTRRFYPHVHNMDGFYVAKFKKYA 513

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: Ribosomal (RNA methyltransferase nop2-like protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7W3_PYTIN)

HSP 1 Score: 518 bits (1334), Expect = 1.080e-170
Identity = 267/416 (64.18%), Postives = 332/416 (79.81%), Query Frame = 0

Query:  246 MDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA 659
            +DIER+++ LD++ AR  AE  +E +  +  +     E   L        EE +E  E+    P  + +RI+ VI+VLS F+ +R+P  SR +Y+E LA DL  Y+G+ REL+DMF+ MFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+SMC VMALAPQ  ERVLDM+ APGGK+TYI+QLM+NTG VIANDL+ QR +ATVANLHRLGV+N  V C+DGRK+P  FKG DRVLLDAPC+GLGVI+RD S+K Q+T KD+ R +HLQKELL AA+DAV AKS TGG IVYSTCSV V ENE V++Y L+KR VKLV TGLD G+ GF+R+Q++RFHPS+NLTRRFYPHVHNMDGF+VAK KK+A
Sbjct:  121 LDIERKARRLDERQAREAAEAEEEMRLNIANN-----ERFHLPTE-----EEQDEEAEDAATDPAEVYQRIKDVIEVLSHFKERREPGRSRVEYVETLAADLANYFGYNRELIDMFMQMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLATALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSMCAVMALAPQLNERVLDMACAPGGKTTYISQLMKNTGTVIANDLKKQRLKATVANLHRLGVKNCTVSCYDGRKVPSLFKGFDRVLLDAPCTGLGVIARDPSIKTQKTEKDVQRLAHLQKELLLAAIDAVDAKSATGGYIVYSTCSVMVEENEAVVDYALKKRCVKLVDTGLDHGKAGFTRYQQQRFHPSVNLTRRFYPHVHNMDGFYVAKFKKYA 526

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=G4YQA7_PHYSP)

HSP 1 Score: 513 bits (1320), Expect = 1.110e-170
Identity = 258/389 (66.32%), Postives = 321/389 (82.52%), Query Frame = 0

Query:  299 EEGQ-EEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA---PGERKAVSTGAGVPDKDAPEAN 681
            EEG+ ++++  P  + +RI+ V++VLS F ++R+P  SR DY+E LAKDL  Y+G+ REL+DMFL MFSPAECVEF+EA+++PRPLVIR NTLK RR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ  ERVLDM+ APGGK+TYIAQLM+NTG +IANDL+ QR +ATVANLHRLGV+N  V C+DGRK+P  FKG DRVLLDAPC+G+GVI+RD S+K Q+  KD+ R +HLQKELL AA+DAV AKS TGG I+YSTCSV V ENE V++Y L+KR VKLV TGLD G+PGF+R+Q++RFHPS+ LTRRFYPHVHNMDGF+VAK KK+A   P E K         +++A EAN
Sbjct:   21 EEGEGDDDMTDPAEVYQRIKDVVEVLSHFSARREPGRSRVDYVESLAKDLAGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQMNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKRCVKLVDTGLDHGKPGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYANTMPSEEKDAKKTVDELEEEAEEAN 409

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BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLF9_9STRA)

HSP 1 Score: 518 bits (1333), Expect = 1.740e-170
Identity = 268/416 (64.42%), Postives = 339/416 (81.49%), Query Frame = 0

Query:  246 MDIERQSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA 659
            +DIER+++ LD++ A +QAE   EA E +  ++    E   L        ++ +E  EEE   P  + +R++ VI+VL++F+ +R+P  SR DY+E LAKD+  Y+G+ REL+DMFL MFSPAEC+EF+EA+++PRPLVIR NTLKTRR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ  ERVLDM+ APGGK+TYIAQLM+NTG VIANDL+ QR +ATVANLHRLGV+N  V C+DGRK+P  FKG DRVLLDAPC+G+GVI+RD S+K Q+T KD+ R +HLQKELL AA+DAV AKS TGG I+YSTCSV V ENE V++Y L+KR VKLV TGLD G+PGF+R+Q++RFHPS+ LTRRFYPHVHNMDGF+VAKLKK+A
Sbjct:  111 LDIERKARLLDEEEA-LQAE---EADEEMRLNIAN-NEPYHL--------QDEDELGEEEASDPAEIYQRMKDVIEVLAQFKDRREPGRSRVDYVETLAKDIANYFGYNRELIDMFLKMFSPAECLEFVEANEQPRPLVIRTNTLKTRRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQLNERVLDMACAPGGKTTYIAQLMKNTGTVIANDLKKQRLKATVANLHRLGVKNTSVSCNDGRKVPTLFKGFDRVLLDAPCTGMGVIARDPSIKTQKTEKDVFRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVEENEAVVDYALRKRCVKLVETGLDHGKPGFTRYQQQRFHPSVGLTRRFYPHVHNMDGFYVAKLKKYA 513

[Close]

BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Match: SAM_MT_RSMB_NOP (domain-containing protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GV82_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 1.100e-169
Identity = 265/419 (63.25%), Postives = 336/419 (80.19%), Query Frame = 0

Query:  246 MDIERQSKALDKKAARMQAELRDEAKEGL---ERDVLEGREALGLVPAGEGDGEEGEEGQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEYYGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEALIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPVMALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVANLHRLGVRNALVCCHDGRKIP--FKGVDRVLLDAPCSGLGVISRDQSVKIQRTTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIEYILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGFFVAKLKKFA 659
            +DIER+++ LD++ A    E  +E +  +   E+  L+  E L          EEGEE  ++++  P  + +RI+ V++VLS+F ++R+P  SR DY+E LAKDL  Y+G+ REL+DMFL MFSPAECVEF+EA+++PRPLVIR NTLK RR+DLA+ALI+RGV+L+P+AKWSKVGLKI +S +PIGATPEYLAGHYMLQSA+S+C VMALAPQ  ERVLDM+ APGGK+TYIAQLM+NTG +IANDL+ QR +ATVANLHRLGV+N  V C+DGRK+P  FKG DRVLLDAPC+G+GVI+RD S+K Q+  KD+ R +HLQKELL AA+DAV AKS TGG I+YSTCSV V ENE V++Y L+KR VKLV TGLD G+ GF+R+Q++RFHPS+ LTRRFYPHVHNMDGF+VAK KK+A
Sbjct:   98 LDIERKARLLDEEEALQAQEAEEEMRLNIANNEKYHLQTEEELA---------EEGEE--DDDMTDPAEVYQRIKDVVEVLSQFSARREPGRSRVDYMESLAKDLSGYFGYNRELIDMFLKMFSPAECVEFVEANEQPRPLVIRTNTLKARRRDLAQALIQRGVNLDPLAKWSKVGLKIYDSPVPIGATPEYLAGHYMLQSASSICAVMALAPQLNERVLDMACAPGGKTTYIAQLMKNTGTIIANDLKKQRLKATVANLHRLGVKNTSVSCYDGRKVPSLFKGFDRVLLDAPCTGMGVIARDPSIKTQKGEKDVQRLAHLQKELLLAAIDAVDAKSKTGGYILYSTCSVMVDENESVVDYALRKRCVKLVDTGLDHGKAGFTRYQQQRFHPSVQLTRRFYPHVHNMDGFYVAKFKKYA 505

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig936.17523.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
SAM_MT_RSMB_NOP	0.000e+0	90.13	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
SAM_MT_RSMB_NOP	2.500e-283	95.33	domain-containing protein n=1 Tax=Ectocarpus silic...	[more]
Ribosomal	1.340e-203	65.22	RNA methyltransferase nop2like protein put n=1 Tax...	[more]
SAM_MT_RSMB_NOP	3.080e-174	65.07	domain-containing protein (Fragment) n=1 Tax=Thala...	[more]
SAM_MT_RSMB_NOP	2.540e-173	69.70	domain-containing protein n=1 Tax=Globisporangium ...	[more]
Uncharacterized	4.010e-173	64.42	protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep...	[more]
Ribosomal	1.080e-170	64.18	RNA methyltransferase nop2-like protein n=2 Tax=Py...	[more]
SAM_MT_RSMB_NOP	1.110e-170	66.32	domain-containing protein n=2 Tax=Phytophthora Tax...	[more]
SAM_MT_RSMB_NOP	1.740e-170	64.42	domain-containing protein n=1 Tax=Pythium brassicu...	[more]
SAM_MT_RSMB_NOP	1.100e-169	63.25	domain-containing protein n=5 Tax=Phytophthora ker...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 709..729
None	No IPR available	COILS	Coil	Coil	coord: 245..272
None	No IPR available	GENE3D	3.30.70.3130		coord: 340..446 e-value: 4.6E-33 score: 115.3
None	No IPR available	PANTHER	PTHR22807	NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING	coord: 149..660
None	No IPR available	PANTHER	PTHR22807:SF30	28S RRNA (CYTOSINE(4447)-C(5))-METHYLTRANSFERASE-RELATED	coord: 149..660
IPR023273	RNA (C5-cytosine) methyltransferase, NOP2	PRINTS	PR02012	RCMTNOP2	coord: 392..405 score: 67.53 coord: 369..381 score: 49.41 coord: 336..356 score: 40.81
IPR023267	RNA (C5-cytosine) methyltransferase	PRINTS	PR02008	RCMTFAMILY	coord: 462..472 score: 67.2 coord: 580..596 score: 56.64 coord: 433..447 score: 30.6 coord: 640..657 score: 44.91 coord: 526..538 score: 74.87
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PFAM	PF01189	Methyltr_RsmB-F	coord: 450..656 e-value: 1.1E-66 score: 224.3
IPR001678	SAM-dependent methyltransferase RsmB/NOP2-type	PROSITE	PS51686	SAM_MT_RSMB_NOP	coord: 373..658 score: 67.413
IPR031341	Ribosomal RNA small subunit methyltransferase F, N-terminal	PFAM	PF17125	Methyltr_RsmF_N	coord: 368..447 e-value: 2.3E-9 score: 37.6
IPR011023	Nop2p	TIGRFAM	TIGR00446	TIGR00446	coord: 385..657 e-value: 4.5E-92 score: 306.0
IPR018314	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site	PROSITE	PS01153	NOL1_NOP2_SUN	coord: 525..536
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 364..657

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig936	contig	Ecto-sp9_F_contig936:3536..14803 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig936.17523.1	mRNA_Ecto-sp9_F_contig936.17523.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig936 3536..14803 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig936.17523.1 ID=prot_Ecto-sp9_F_contig936.17523.1|Name=mRNA_Ecto-sp9_F_contig936.17523.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=884bp
MPAKRRPTPTKAEGSSDNAKNGVKKAAAAAAKSPPPSAGKKKKAPPPIAA
APHTSREKGKGAFLGKGGVLTLGGKTSGGGRGKGGGRGSNSSPGRGGHGG
PKKGRGGAAGGRGEATATKAATAVEGSNASSEEDGESEDGGELDEMVESS
EDGSEEEEEAERTGAKAKANKSKHVGGKRQEEDSSEGEESEQELQSFMEA
FPGMSSDEEEGEDGTGLGGAGMVSDGSSSDDAGSDSDEDEEDAGLMDIER
QSKALDKKAARMQAELRDEAKEGLERDVLEGREALGLVPAGEGDGEEGEE
GQEEEVVPPQVLKERIESVIDVLSEFQSKRDPALSRADYLERLAKDLKEY
YGFLRELVDMFLLMFSPAECVEFLEASDKPRPLVIRANTLKTRRKDLAEA
LIKRGVSLEPVAKWSKVGLKITESQIPIGATPEYLAGHYMLQSAASMCPV
MALAPQQGERVLDMSAAPGGKSTYIAQLMRNTGVVIANDLRPQRQRATVA
NLHRLGVRNALVCCHDGRKIPFKGVDRVLLDAPCSGLGVISRDQSVKIQR
TTKDILRSSHLQKELLCAAVDAVSAKSTTGGVIVYSTCSVSVAENEQVIE
YILQKRYVKLVPTGLDFGRPGFSRFQERRFHPSMNLTRRFYPHVHNMDGF
FVAKLKKFAPGERKAVSTGAGVPDKDAPEANEAGAAGAADEMDVDFSGSD
EDEDSKTKRKRAKKEAKRDARNNAKAQKAVGAEIKEVNSDEEEDGGEQSR
PAAKKSKPDPTAAANGHSTPGRGRGRGAARGDGGGRGGRGSAGSPGRGTS
RGGRGRLSSGGRSSGGYASAGRNPGGFGGGRSFGGGRGGGRGRGRGGRDG
GRGGGVRGGRGGGRGGGRGRGGGRGGGRGRGRG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023273	RCMT_NOP2
IPR023267	RCMT
IPR001678	MeTrfase_RsmB/NOP2
IPR031341	Methyltr_RsmF_N
IPR011023	Nop2p
IPR018314	Fmu/NOL1/Nop2p_CS
IPR029063	SAM-dependent_MTases