prot_Ecto-sp9_F_contig934.17497.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig934.17497.1
Unique Nameprot_Ecto-sp9_F_contig934.17497.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length302
Homology
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Ubiquitin-conjugating (enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 2.250e-113
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 163
            MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV
Sbjct:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 163          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Ubiquitin-conjugating (enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 268 bits (685), Expect = 7.220e-87
Identity = 124/153 (81.05%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 157
            SP+KRRD DMMKLMMSDF VHIPDE SMHDF+VAFPGP +TPY+GGVWKVHV+LP+EYP++SPSIGFENR++HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDPKAY  RIRE VRLHAS  +  D
Sbjct:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 247 bits (630), Expect = 9.110e-79
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            +P+KRR  DMMKLMMSD+EV+IPDESSMHDF V F GP DTPY+GGVWK+HVTLP  YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+P LL YPNPTDPLNGEAAAL+MRDP AY  RIRE VR  A+  + L
Sbjct:    6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARIDL 157          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.320e-76
Identity = 112/152 (73.68%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDG 158
            SKR   DMMKLMMSD+EVHIP+E S+H+F V F GP +TPY+GGVWKVHV LP++YPFKSPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+PQLL YPNPTDPLNGEA AL+MRDP+AY +RIR+ VR  AS  V L G
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTVELKG 171          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Ubiquitin-conjugating (enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 238 bits (607), Expect = 8.330e-76
Identity = 109/153 (71.24%), Postives = 136/153 (88.89%), Query Frame = 0
Query:    4 MSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            MS +KRR+ D+MKLMMS+++VH+ DES  +DF V F GP+DTPY+GG+WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FIPQLL YPNPTDPLNGEAA+LLM+D +AY+ ++RE VR +AS P+ +
Sbjct:    1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPIDM 153          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 242 bits (617), Expect = 8.530e-76
Identity = 115/154 (74.68%), Postives = 132/154 (85.71%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDG 158
            +P+KRR  DMMKLMMSD+EV IPDES MHDF V F GP +TPY+ G WK+HVTLP +YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF+ F+P LL YPNPTDPLNGEAAALLMRDP AY+ RIR+ VR +AS  + L G
Sbjct:   65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKIDLVG 218          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 233 bits (595), Expect = 5.660e-74
Identity = 106/152 (69.74%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            S +KRR+TD+MKLMMSD+EV + DE+  +DF V F GP +TPY+GGVWK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+LVN+F++FIPQLL YPNP+DPLNGEAA+LLM+D  AY+ +++E VR +AS P+ +
Sbjct:    3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPIDM 154          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: Hypothetical (protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 236 bits (603), Expect = 1.940e-73
Identity = 110/150 (73.33%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    2 LSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHAS 151
            LS SPSKRRD D+++LMMSD+EV +PDE  ++DF VAF GPE TPY+GGVW VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMFDL+NIF++F+PQLL  PNPTDPLNGEAAALL+RDP+AY  +++  V  +AS
Sbjct:   80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: UBC (core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM)

HSP 1 Score: 231 bits (590), Expect = 3.130e-73
Identity = 104/150 (69.33%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            +KRR+TD+MKLMMSD+EVH+ DE+   D  + F GP+DTPY+GG WK+HVTLPK+YPFKSPSIGF NR++HPNVDE SGSVCLDVINQTWSPMF+LVNIF +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y+ +++E VR +AS P+ +
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEYVRNYASQPIEM 154          
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Match: UBC (core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGM6_GLOUD)

HSP 1 Score: 229 bits (585), Expect = 1.790e-72
Identity = 105/153 (68.63%), Postives = 134/153 (87.58%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 157
            S ++RR+TD+MKLMMSD+EV + DES   DF V F GP+D+PY+GG WK+HV+LP+EYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+L+N+F +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y+N++RE VR +AS   H+D
Sbjct:    3 SMNRRRETDVMKLMMSDYEVQLTDESKTSDFHVKFHGPKDSPYEGGSWKIHVSLPREYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELLNVFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNNKVREYVRTYASQ--HID 153          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig934.17497.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Ubiquitin-conjugating2.250e-113100.00enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Ubiquitin-conjugating7.220e-8781.05enzyme/RWD-like protein n=1 Tax=Tribonema minus Ta... [more]
Hypothetical9.110e-7976.97protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.320e-7673.68protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Ubiquitin-conjugating8.330e-7671.24enzyme E2, putative n=1 Tax=Pythium insidiosum Tax... [more]
Hypothetical8.530e-7674.68protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized5.660e-7469.74protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical1.940e-7373.33protein n=4 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
UBC3.130e-7369.33core domain-containing protein n=31 Tax=Peronospor... [more]
UBC1.790e-7268.63core domain-containing protein n=2 Tax=Pythiaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..151
e-value: 1.9E-46
score: 170.3
NoneNo IPR availablePANTHERPTHR24068:SF142coord: 4..151
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 4..151
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 5..155
e-value: 2.0E-54
score: 185.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..150
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 13..145
e-value: 2.2E-38
score: 131.1
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 28..140
score: 33.099
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 76..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig934contigEcto-sp9_F_contig934:9718..13653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig934.17497.1mRNA_Ecto-sp9_F_contig934.17497.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig934 9718..14068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig934.17497.1 ID=prot_Ecto-sp9_F_contig934.17497.1|Name=mRNA_Ecto-sp9_F_contig934.17497.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=302bp
MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGG
VWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF
DLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHA
SDPVHLDGTPVVVAPPPPPPSAAAAAASGGGAAAAAAAAAASPSTSVATS
ASSDVSDMSSSDEKPPPASDNANGDSSNAVVLGKEDDATMGEAGGNGEAT
KRRDSAPGGGGGGNNNDGANSSRSSSGSDFMMEMEMDETSSDVSALSDIG
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS