prot_Ecto-sp9_F_contig932.17482.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig932.17482.1
Unique Nameprot_Ecto-sp9_F_contig932.17482.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length202
Homology
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BLAST of mRNA_Ecto-sp9_F_contig932.17482.1 vs.
Match: NB-ARC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYL2_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 4.990e-78
Identity = 142/167 (85.03%), Postives = 143/167 (85.63%), Query Frame = 0 
Query:    1 MAARNTPVRDELVLSLDDILPVLKNGDGIPVVKHNNRGQSDQRRLRLDTDDSTLEVFRQSTNAYYFNRKTRTYNLRNLEE----------VGPATSVPGGQGGRAASPGRTLVFVFSNRNLYVTVETREVCAALVALFRPAGSALPNGSGXXXXXXXXXAVTAAQRG 157
            MAARNTPVRDELVLSLDDILPVLKNGDGIPVVKH+NRGQSDQRRLRLDTDDSTLEVFRQSTNAYYFNRKTR YNLRNLEE          VGPATSVPG QGGRAASPGRTLVFVFSNR LYVTVETREVCAALVALFRPAGSALPNGS          AVTAAQ G
Sbjct:    1 MAARNTPVRDELVLSLDDILPVLKNGDGIPVVKHSNRGQSDQRRLRLDTDDSTLEVFRQSTNAYYFNRKTRAYNLRNLEEALGYGSRSRGVGPATSVPGAQGGRAASPGRTLVFVFSNRTLYVTVETREVCAALVALFRPAGSALPNGSRGGQQQHQGGAVTAAQVG 167
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig932.17482.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
NB-ARC4.990e-7885.03domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig932contigEcto-sp9_F_contig932:20361..21860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig932.17482.1mRNA_Ecto-sp9_F_contig932.17482.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig932 20361..26413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig932.17482.1 ID=prot_Ecto-sp9_F_contig932.17482.1|Name=mRNA_Ecto-sp9_F_contig932.17482.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=202bp
MAARNTPVRDELVLSLDDILPVLKNGDGIPVVKHNNRGQSDQRRLRLDTD
DSTLEVFRQSTNAYYFNRKTRTYNLRNLEEVGPATSVPGGQGGRAASPGR
TLVFVFSNRNLYVTVETREVCAALVALFRPAGSALPNGSGGGQQQQQGGA
VTAAQRGRGRGRGGPPRTLRRRGELWSSTPGVPAVSPGRGMPGTRMATRA
T*
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