prot_Ecto-sp9_F_contig9302.17465.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9302.17465.1
Unique Nameprot_Ecto-sp9_F_contig9302.17465.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length131
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9302.17465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX8_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 5.490e-83
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0 
Query:    1 MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRQDRHPVVPGDVPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRRQHGHHHLHHQR 130
            MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDR+DRHPVVPGD+PALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPR+LYRELQDCVTQDAMLLSPLPRRR+QHGHHHLHHQR
Sbjct:    1 MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRRDRHPVVPGDIPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRYLYRELQDCVTQDAMLLSPLPRRRQQHGHHHLHHQR 130
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9302.17465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF2_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 4.490e-58
Identity = 104/130 (80.00%), Postives = 110/130 (84.62%), Query Frame = 0 
Query:    1 MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRQDRHPVVPGDVPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRRQHGHHHLHHQR 130
            MKNRVMHLEAALVRSELDLCR                   +AATDR+DRHPVVPGD+PALYHALEGSVVLLQIASEKML LEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRR+QHGH+H+HHQR
Sbjct:  631 MKNRVMHLEAALVRSELDLCRXXXXXXXXXXXXXXXXXXXEAATDRRDRHPVVPGDIPALYHALEGSVVLLQIASEKMLCLEHTIAKHREAMPRHLYRELQDCVTQDAMLLSPLPRRRQQHGHYHVHHQR 760
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9302.17465.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized5.490e-8396.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.490e-5880.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableCOILSCoilCoilcoord: 71..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9302contigEcto-sp9_F_contig9302:462..3058 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9302.17465.1mRNA_Ecto-sp9_F_contig9302.17465.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9302 7..3059 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9302.17465.1 ID=prot_Ecto-sp9_F_contig9302.17465.1|Name=mRNA_Ecto-sp9_F_contig9302.17465.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=131bp
MKNRVMHLEAALVRSELDLCRARTELEANRREAEALSQAKDAATDRQDRH
PVVPGDVPALYHALEGSVVLLQIASEKMLRLEHTIAKHREAMPRHLYREL
QDCVTQDAMLLSPLPRRRRQHGHHHLHHQR*
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