prot_Ecto-sp9_F_contig9240.17410.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9240.17410.1
Unique Nameprot_Ecto-sp9_F_contig9240.17410.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length289
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9240.17410.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU64_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 2.060e-56
Identity = 122/220 (55.45%), Postives = 123/220 (55.91%), Query Frame = 0 
Query:   69 GNQGGGVVRAGVGACTGYVRTTRSRGVPPGADMGGVEHLRSRKRRSGSISAGASFSRTARTPSVLPAEGTLAGMDTASSSSAAAPFTRRLRRVRVGHATVNVTSAATTAAGQQRAATCGVERTTRDLGVVSPSPLGLPRTSSTLARLMQLGGGKEAPGFDAAVRASAASSDGNTGGVEVAAVADAVDAGDDDKSSSSDGGAAHEDLSAWLHSTHDWWTSD 288
            GN  GGVVRAGVGACTG+VRTTRSRGVPPGA MGGVEHLRSRKRRSGSISAGASFS                                                                                         RLMQ GGGKEAPGFDAAVRASAASSDGNTGGVEVAAVADAVDAGDDDK    DGGAAHEDLSAWLHSTHDWWTSD
Sbjct:    2 GNPDGGVVRAGVGACTGHVRTTRSRGVPPGAGMGGVEHLRSRKRRSGSISAGASFS-----------------------------------------------------------------------------------------RLMQQGGGKEAPGFDAAVRASAASSDGNTGGVEVAAVADAVDAGDDDKXXXXDGGAAHEDLSAWLHSTHDWWTSD 132
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BLAST of mRNA_Ecto-sp9_F_contig9240.17410.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGC1_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.260e-18
Identity = 51/75 (68.00%), Postives = 53/75 (70.67%), Query Frame = 0 
Query:  216 MQLGGGKEAPGFDAAVRASAASSDGNT--GGVEVAAVADAVDAGDDDKSSSSDGGAAHEDLSAWLHSTHDWWTSD 288
            MQ GGGK+APGFDAAVRASAASSDGN            DA+D GD       D GAAHEDLSAWLHSTHDWWTSD
Sbjct:    1 MQEGGGKKAPGFDAAVRASAASSDGNARXXXXXXXXXPDAIDVGDXXXXXXXDEGAAHEDLSAWLHSTHDWWTSD 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9240.17410.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.060e-5655.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.260e-1868.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9240contigEcto-sp9_F_contig9240:662..1816 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9240.17410.1mRNA_Ecto-sp9_F_contig9240.17410.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9240 662..1816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9240.17410.1 ID=prot_Ecto-sp9_F_contig9240.17410.1|Name=mRNA_Ecto-sp9_F_contig9240.17410.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=289bp
MDSLADGVSSLGVASPDAAAAGSSSSSGGWNQAEAPRTPYGCTWRRDSFG
GQTDGSSQTLCPVSALVRGNQGGGVVRAGVGACTGYVRTTRSRGVPPGAD
MGGVEHLRSRKRRSGSISAGASFSRTARTPSVLPAEGTLAGMDTASSSSA
AAPFTRRLRRVRVGHATVNVTSAATTAAGQQRAATCGVERTTRDLGVVSP
SPLGLPRTSSTLARLMQLGGGKEAPGFDAAVRASAASSDGNTGGVEVAAV
ADAVDAGDDDKSSSSDGGAAHEDLSAWLHSTHDWWTSD*
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