prot_Ecto-sp9_F_contig9239.17406.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9239.17406.1
Unique Nameprot_Ecto-sp9_F_contig9239.17406.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length215
Homology
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG2_ECTSI)

HSP 1 Score: 429 bits (1103), Expect = 9.260e-148
Identity = 209/215 (97.21%), Postives = 213/215 (99.07%), Query Frame = 0
Query:    1 MHRSYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            MHRSYPNFSFTVESECQE TKARTGT+STPHG+VQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVG+EIKGRRGAEGG EFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQA+
Sbjct:    1 MHRSYPNFSFTVESECQEGTKARTGTVSTPHGLVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGNEIKGRRGAEGGAEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAL 215          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: tRNA-guanine(15) (transglycosylase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU6_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.240e-96
Identity = 147/211 (69.67%), Postives = 170/211 (80.57%), Query Frame = 0
Query:    4 SYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFI-DGDDGTQ 213
            +YP F+F +    Q ++ ARTG L+TPHGVV+TPAFIFCATKAAIKGL+ E MK C +QI+LSNTYHL VQPG E I  MGGLQKAT W GPMLTDSGGYQIFSMGHGSV DEIKGRRGA       PSL+SI EKGARFKSY+D SIK L+PE SI+IQR LGADL++VLDECTPFHVDK+YT +S  R+HRWA+RSL EF+   ++G Q
Sbjct:   34 TYPGFNFEILHRDQGDSDARTGRLTTPHGVVETPAFIFCATKAAIKGLTMEQMKACDTQIVLSNTYHLHVQPGSEAIRDMGGLQKATNWRGPMLTDSGGYQIFSMGHGSVSDEIKGRRGATDANPNPPSLLSIGEKGARFKSYHDGSIKQLSPETSIQIQRDLGADLILVLDECTPFHVDKEYTAASTRRSHRWALRSLNEFVRTANEGAQ 244          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNN8_HETAK)

HSP 1 Score: 281 bits (720), Expect = 9.300e-90
Identity = 138/228 (60.53%), Postives = 171/228 (75.00%), Query Frame = 0
Query:    5 YPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKG-LSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGA----------------EGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            YPNFSF ++ + + ++KART T+STPHG +QTPAFIFCATKAAIKG +    +++  +QIILSNTYHL++QPGGE++ KMGGLQK + W GPMLTDSGGYQIFSMGHGSV  EIKG RG                 E G  + P+L+ ++E GARF+SY D SI  LTPE+SI+IQR LGADL+VVLDECT +H+ KD T  SM  +HRWA+RSL EFI GDDG+QA+
Sbjct:   49 YPNFSFKIKYQDKSDSKARTTTISTPHGEIQTPAFIFCATKAAIKGGIDPPKLRQADTQIILSNTYHLMLQPGGELVRKMGGLQKFSGWNGPMLTDSGGYQIFSMGHGSVSQEIKGNRGQKKSSKXXXXXXXXNDKEKGDRWVPTLLEVNENGARFRSYLDGSIWELTPEKSIQIQRDLGADLIVVLDECTAYHIGKDGTAESMRMSHRWALRSLAEFIRGDDGSQAL 276          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase n=1 Tax=Caedimonas varicaedens TaxID=1629334 RepID=A0A0K8MFV7_9PROT)

HSP 1 Score: 271 bits (692), Expect = 7.540e-87
Identity = 133/211 (63.03%), Postives = 159/211 (75.36%), Query Frame = 0
Query:    5 YPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            YP FSF +       + AR G L TPHG ++TPAFIFCATK AIKG     MK  G+QIILSNTYH+++QPG E++EKMGGL K   W+GPMLTDSGGYQIFS+GHGSV  EIKG+R          +++ I+E+GARFKSY +  I  LTPERS+EIQRQLGADL+VVLDECTPFHVDK YT+ SMH +HRWA+RSL EF  G+DG QA+
Sbjct:    4 YPKFSFNITHR-SAVSGARAGLLKTPHGTIETPAFIFCATKGAIKGAFPREMKAAGTQIILSNTYHMMLQPGSELVEKMGGLHKFIGWDGPMLTDSGGYQIFSLGHGSVASEIKGKRVTH----RPKTMLKITEEGARFKSYINGQIFLLTPERSLEIQRQLGADLIVVLDECTPFHVDKSYTECSMHLSHRWALRSLAEFQRGNDGRQAL 209          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase n=1 Tax=Candidatus Nucleicultrix amoebiphila FS5 TaxID=1414854 RepID=A0A1W6N307_9PROT)

HSP 1 Score: 266 bits (681), Expect = 3.550e-85
Identity = 132/215 (61.40%), Postives = 163/215 (75.81%), Query Frame = 0
Query:    1 MHRSYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            M+  YP FSF  + +  + +KA+  TL TPHG V TP FIFCATKAAIKGL+   MKE G++IILSNTYHL++QPGG+ +E+ GGL +   W+GPMLTDSGG+QIFS+GHGSV +EIKG+R          +L+ ISE+GA FKSY D ++ +LTPE SIEIQRQLGADL+VVLDECTPFHVDK YT+ SMH THRW +RSL EF   + G QA+
Sbjct:    1 MNSLYPRFSFQTQYQ-DKFSKAKVATLVTPHGAVTTPNFIFCATKAAIKGLTPAQMKEAGTEIILSNTYHLMLQPGGKRVERRGGLHRFMGWDGPMLTDSGGFQIFSLGHGSVANEIKGKRLTH----RQKTLLKISEEGAVFKSYLDGALHTLTPESSIEIQRQLGADLIVVLDECTPFHVDKSYTEKSMHLTHRWGLRSLEEFKRTNSGQQAI 210          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2Z8C4_9PROT)

HSP 1 Score: 266 bits (680), Expect = 4.600e-85
Identity = 132/215 (61.40%), Postives = 161/215 (74.88%), Query Frame = 0
Query:    1 MHRSYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            M   YPNFSF  +S C     AR G + TPHGVV+TPAFIFCATK A+K ++   MK   +QIILSNTYH+++QPG E+++KMGGL K   WEGP+LTDSGG+QIFS+GHGSV DEIKG+R +  G     S+V I E+GA F+SY D     LTPE+SI++QRQLGADL+VVLDECTPFHVDK YTK SM  +HRWA+RSL EF  G+  TQA+
Sbjct:    1 MFPRYPNFSFKAQS-CANAGSARLGEIITPHGVVKTPAFIFCATKGAMKAIAMPEMKAADTQIILSNTYHMMLQPGSELVQKMGGLHKFCGWEGPLLTDSGGFQIFSLGHGSVSDEIKGKRSSGKGRS---SVVKIKEEGASFRSYIDGKKWLLTPEQSIQVQRQLGADLIVVLDECTPFHVDKAYTKRSMEMSHRWALRSLAEFDKGNTHTQAL 211          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZ54_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.170e-85
Identity = 127/212 (59.91%), Postives = 163/212 (76.89%), Query Frame = 0
Query:    4 SYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            +Y NF F +     + +KAR G L TPHG ++TP F+FCATKAA K ++ + +++ GSQIILSNTYHL++ PG E+I+KMGGLQK T W GPMLTDSGGYQIFSMG+GSV ++IKG+R A     + PSL+SI+E  A F+SY D SI  L+PE++I IQRQLGADL+VVLDECTPF+VDK+YT  SM R+HRWA R L+EF +  +G QA+
Sbjct:   23 NYDNFKFDIIHN-SKLSKARCGLLVTPHGNIETPNFVFCATKAAGKAITTKQLRDEGSQIILSNTYHLMLTPGSELIDKMGGLQKFTDWRGPMLTDSGGYQIFSMGYGSVSNDIKGKRNANATNTYKPSLISINENEAIFRSYVDGSIIKLSPEKAINIQRQLGADLIVVLDECTPFNVDKEYTAESMRRSHRWAYRCLKEFTNTHNGKQAL 233          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GH72_9EUGL)

HSP 1 Score: 271 bits (694), Expect = 1.030e-84
Identity = 134/213 (62.91%), Postives = 165/213 (77.46%), Query Frame = 0
Query:    4 SYPNFSFTV-ESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            +YPNF + V +S       AR G L+TPHG V+TPAFIFCATKA  KG++ E ++E GSQIILSNTYHL++QPG E+I+ +GGLQK T W GPMLTDSGGYQIFSMG GSV  EIKGR   E    + PS+  I+E GA F+SY+D S + LTPERSI +Q++LGADL++VLDECTPF+VDK+YT  S  R+HRWA+RSL EF+ GDDGTQA+
Sbjct:  200 TYPNFRWVVLQSGTAGAPAARLGLLTTPHGTVETPAFIFCATKACCKGMTPEMLREAGSQIILSNTYHLMLQPGSEIIKTLGGLQKTTGWRGPMLTDSGGYQIFSMGFGSVSSEIKGRHMTED-CGWKPSVQRINENGAEFRSYHDGSRQLLTPERSINVQQELGADLILVLDECTPFNVDKEYTAQSTRRSHRWAIRSLDEFVRGDDGTQAL 411          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase n=2 Tax=Micavibrio aeruginosavorus TaxID=349221 RepID=G2KN59_MICAA)

HSP 1 Score: 265 bits (677), Expect = 1.130e-84
Identity = 126/212 (59.43%), Postives = 158/212 (74.53%), Query Frame = 0
Query:    4 SYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            +YPNF+F V    Q  T+AR G L TPHG ++TP +IFC TK AIK LS   M+E G+ IIL NTYHL++QPG ++IE+MGGL +  RW+GPM+TDSGG+QIFSMGHG V DEIKGR   +G      SL+ ISE+GARFKSY+D SI +LTPE SI IQR++GADL+   DECT +HV++ YT+ SMHR+HRW  RS+ EF  G DG QA+
Sbjct:    3 TYPNFAFDVLHRDQNGTRARIGRLVTPHGTIETPNYIFCGTKGAIKNLSPMQMREAGADIILGNTYHLMIQPGADLIERMGGLHEFNRWDGPMMTDSGGFQIFSMGHGGVADEIKGRSNNKG---RGKSLLEISEEGARFKSYWDGSILNLTPEESISIQRKVGADLIYQFDECTAYHVERSYTEESMHRSHRWGDRSIAEFERGHDGRQAL 211          
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Match: Queuine (tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium 33-17 TaxID=1895704 RepID=A0A1Q3P6D1_9PROT)

HSP 1 Score: 264 bits (675), Expect = 2.690e-84
Identity = 131/211 (62.09%), Postives = 157/211 (74.41%), Query Frame = 0
Query:    5 YPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKGLSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDSGGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQAV 215
            YPNF F V      ++ ARTG L TPHGVV+TP FIFCATKA+IKG+  + M E  +QIILSNTYHL++QPG E+++K+GGL K   W GPM TDSGGYQIFS+GHGSV  EIKG+R          +L+ I+E+GARFKSY D S   LTPE+SI+IQR LGADL+VVLDECTPFHVDK YT  SM  +HRWA+RSL EF   DD +QA+
Sbjct:    2 YPNFKFEVTYN-DPDSSARTGLLHTPHGVVETPNFIFCATKASIKGVMPQDMLEANTQIILSNTYHLMLQPGSEVVKKLGGLHKMMGWNGPMFTDSGGYQIFSLGHGSVASEIKGKRNGN----RPKTLLKITEEGARFKSYVDGSYHMLTPEKSIQIQRDLGADLIVVLDECTPFHVDKAYTAKSMRMSHRWALRSLEEFKRTDDHSQAL 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9239.17406.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Queuine9.260e-14897.21tRNA-ribosyltransferase catalytic subunit 1 n=1 Ta... [more]
tRNA-guanine(15)1.240e-9669.67transglycosylase-like protein n=1 Tax=Tribonema mi... [more]
Queuine9.300e-9060.53tRNA-ribosyltransferase catalytic subunit 1 n=1 Ta... [more]
Queuine7.540e-8763.03tRNA-ribosyltransferase n=1 Tax=Caedimonas varicae... [more]
Queuine3.550e-8561.40tRNA-ribosyltransferase n=1 Tax=Candidatus Nucleic... [more]
Queuine4.600e-8561.40tRNA-ribosyltransferase n=2 Tax=Alphaproteobacteri... [more]
Hypothetical6.170e-8559.91protein (Fragment) n=2 Tax=Chromulina nebulosa Tax... [more]
Queuine1.030e-8462.91tRNA-ribosyltransferase catalytic subunit 1 n=1 Ta... [more]
Queuine1.130e-8459.43tRNA-ribosyltransferase n=2 Tax=Micavibrio aerugin... [more]
Queuine2.690e-8462.09tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002616tRNA-guanine(15) transglycosylase-likeTIGRFAMTIGR00449TIGR00449coord: 16..205
e-value: 2.7E-55
score: 185.7
IPR002616tRNA-guanine(15) transglycosylase-likePFAMPF01702TGTcoord: 21..205
e-value: 1.1E-47
score: 162.9
IPR036511Queuine tRNA-ribosyltransferase-likeGENE3D3.20.20.105coord: 1..214
e-value: 7.3E-68
score: 231.0
IPR036511Queuine tRNA-ribosyltransferase-likeSUPERFAMILY51713tRNA-guanine transglycosylasecoord: 8..208
NoneNo IPR availablePANTHERPTHR46499FAMILY NOT NAMEDcoord: 8..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9239contigEcto-sp9_F_contig9239:110..3274 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9239.17406.1mRNA_Ecto-sp9_F_contig9239.17406.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9239 110..3274 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9239.17406.1 ID=prot_Ecto-sp9_F_contig9239.17406.1|Name=mRNA_Ecto-sp9_F_contig9239.17406.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=215bp
MHRSYPNFSFTVESECQEETKARTGTLSTPHGVVQTPAFIFCATKAAIKG
LSAETMKECGSQIILSNTYHLLVQPGGEMIEKMGGLQKATRWEGPMLTDS
GGYQIFSMGHGSVGDEIKGRRGAEGGPEFAPSLVSISEKGARFKSYYDCS
IKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMR
SLREFIDGDDGTQAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002616tRNA_ribo_trans-like
IPR036511TGT-like_sf