prot_Ecto-sp9_F_contig9232.17403.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9232.17403.1
Unique Nameprot_Ecto-sp9_F_contig9232.17403.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length324
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9232.17403.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 8.130e-101
Identity = 229/390 (58.72%), Postives = 241/390 (61.79%), Query Frame = 0 
Query:    1 MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIRRNCVARLWWSRHAGENAETMTWEAFEEAFQSDFGAQLPKTLDVLRKHIAVQGDDYRAAPVPSTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRARRAGESTPARSPQNGDLPATTDVTAAXXXXXSG------GLPGVALSAGESPTPASSRHHRSPSGRCTRT-----------------------------------------------------------------------------GTPANGGGVGGGAQARSGEKVVINVETGEEELQPQEE------EEVDGTVAVARAAEWGALERGFSRLLSSVRREREGAGQKRG 301
            MSLNEGRPNHFGVFRAGVYVQEMRMLEAK       ADNPREEKNAGLETTTVAAGIR NCVARLWW+RHAGENAET+TWEAFEEAFQSDFGAQLP+T++VLRKHIAVQGDDYR APVPST LP  XXXXX       XXXXXXX           PR RR  ESTPARSPQNGDLPATT+V   XXXXX        GLPGVALSA ESPTP                                                                                             GTPANG GVGGG QARSGE+VVINVETG+EELQPQ        EEVDGTVAVARA EWGAL+RGFSRLLSSVRRER+GAG++RG
Sbjct:  198 MSLNEGRPNHFGVFRAGVYVQEMRMLEAK-------ADNPREEKNAGLETTTVAAGIR-NCVARLWWTRHAGENAETLTWEAFEEAFQSDFGAQLPETMEVLRKHIAVQGDDYRPAPVPSTTLPPTXXXXXLRNGRPTXXXXXXX-----------PRERRTRESTPARSPQNGDLPATTNVAXXXXXXXXXXXXXXXGLPGVALSARESPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFDLGTFAXXXXXXXXXXXXXXXXXXXXXXXTQGTPANGCGVGGGEQARSGERVVINVETGQEELQPQXXXXXXXXEEVDGTVAVARAGEWGALDRGFSRLLSSVRRERKGAGRRRG 568
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BLAST of mRNA_Ecto-sp9_F_contig9232.17403.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 8.070e-77
Identity = 155/174 (89.08%), Postives = 156/174 (89.66%), Query Frame = 0 
Query:    1 MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIRRNCVARLWWSRHAGENAETMTWEAFEEAFQSDFGAQLPKTLDVLRKHIAVQGDDYRAAPVPSTALPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRARRAGESTPARSPQNG 174
            MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIR NCVARLWWSRHAGEN ETMTWEAFEEAFQ+DFGAQLPKTLDVLRKHIAVQGDDYRAAPVPSTALPXXXXXXXXXXXXXXXXXX              PR RRAGESTPARS QNG
Sbjct:    1 MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLETTTVAAGIR-NCVARLWWSRHAGENGETMTWEAFEEAFQTDFGAQLPKTLDVLRKHIAVQGDDYRAAPVPSTALPXXXXXXXXXXXXXXXXXXS-------------PRGRRAGESTPARSQQNG 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9232.17403.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.130e-10158.72protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.070e-7789.08protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9232contigEcto-sp9_F_contig9232:584..4857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9232.17403.1mRNA_Ecto-sp9_F_contig9232.17403.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9232 128..5063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9232.17403.1 ID=prot_Ecto-sp9_F_contig9232.17403.1|Name=mRNA_Ecto-sp9_F_contig9232.17403.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=324bp
MSLNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQADNPREEKNAGLET
TTVAAGIRRNCVARLWWSRHAGENAETMTWEAFEEAFQSDFGAQLPKTLD
VLRKHIAVQGDDYRAAPVPSTALPPPPPSLRNHRPTTTTTTTTTTTTTTT
TTTTTSPRARRAGESTPARSPQNGDLPATTDVTAAAAAAASGGLPGVALS
AGESPTPASSRHHRSPSGRCTRTGTPANGGGVGGGAQARSGEKVVINVET
GEEELQPQEEEEVDGTVAVARAAEWGALERGFSRLLSSVRREREGAGQKR
GGAAAAAAAAAAAGRKKPAPLGG*
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