prot_Ecto-sp9_F_contig9223.17398.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9223.17398.1
Unique Nameprot_Ecto-sp9_F_contig9223.17398.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length239
Homology
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Eukaryotic (translation initiation factor 2B gamma subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGC6_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 1.560e-144
Identity = 205/211 (97.16%), Postives = 209/211 (99.05%), Query Frame = 0
Query:    1 QDIDYVGLTQSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINRELLTMREFSDKCPWSMPDGFRPKDSTLVGEGCHLGPKGTLKFSV 211
            +DIDYVGLTQSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQF+NP TGGE L+KRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGV+EVRCFALTLRHGEAYCSQAKTLAAYCTINRELLTMREFSDKCPWSMPDGFRPKDSTLVGEGCHLGPKGTLKFSV
Sbjct:  159 EDIDYVGLTQSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFRNPTTGGEPLTKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVNEVRCFALTLRHGEAYCSQAKTLAAYCTINRELLTMREFSDKCPWSMPDGFRPKDSTLVGEGCHLGPKGTLKFSV 369          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Eukaryotic (translation initiation factor 2B gamma subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP1_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.560e-35
Identity = 90/228 (39.47%), Postives = 129/228 (56.58%), Query Frame = 0
Query:    1 QDIDYVGLTQSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSK----RVGSVAGEALRGDA------------MVARMSSWRPSPDG-DTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINRELLTMREFSDKCPWSMPDGFRPKDSTLVGEGCHLGPKGTLKFSV 211
            +D+D++GLT  GR+V+K P L VEEA+R+QKALLRRH +V++ T+L DV +YVL+  VL  L++ R I S+Q+EL PALVRRQF  P+    + +     R+  +A  A  G              M+ +++  + +P G   A  G+G  GV  V     T   G  YC QA+TLA Y  + ++LL  +  +        +G   KD TL+GEGC +G K T K SV
Sbjct:  158 EDVDFIGLTPDGRVVMKAPLLDVEEAVRVQKALLRRHTSVSIGTSLMDVGLYVLSQSVLQHLEEHRFIGSLQDELAPALVRRQFAPPLPPAPSRTDQARGRISIIAPAASLGHGAPAPVAADYYNDMINKLNIAKGAPGGVAAAGAGDGGGGVCAV--VLRTAADGGGYCRQARTLAQYSGMTKDLLEAQLQAKG--GGRVEGLNRKDQTLIGEGCTVGEKVTCKSSV 381          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: NTP_transferase (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWU8_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.210e-17
Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = 0
Query:    3 IDYVGLTQS-GRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINRELLT 171
            ID VGL +S  R+ +    + + + + + K+LL+R   V L + L D   Y+ AHWV+  L +++ I S++ +L+P LVRRQF+ P    E       SV  +A+   ++ A +S    + D D             VRCFA TL    AYC +A T+AAY  I+ E+ T
Sbjct:  158 IDCVGLVESESRVALIAQAVHMNDDMYVSKSLLKRRTNVALHSDLYDAHFYIFAHWVIDLLLEKKYIASIKADLIPHLVRRQFRGPAALPE-------SVRAKAVSRQSLAASLSLATQAFDPDDV-----------VRCFAYTLPPN-AYCERADTIAAYRAIDAEVAT 308          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H794_9EUKA)

HSP 1 Score: 85.9 bits (211), Expect = 1.090e-15
Identity = 63/227 (27.75%), Postives = 110/227 (48.46%), Query Frame = 0
Query:    2 DIDYVGLTQ-SGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGS-VAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINRELLTMREFSDK----CPWSMPD-----------GFRPKDSTLVGEGCHLGPKGTLKFSV 211
            + +++GL Q SGR+++   K  VE++L + K LL+ H  +TL + L D  +Y+ +HWV+  +   ++I+S+QNEL+P LV+ QF+ P    E  SK V S V     +G+A+   MSS  P               +  + C +  +     +  +  T+ AY   NRE++ + +   K      + +P+            F      ++G+G  +G K  +K SV
Sbjct:  173 ECNFIGLEQDSGRVLVYTAKADVEDSLSVSKRLLQSHPRMTLHSQLDDAHIYIFSHWVIKVILQDKSISSIQNELIPYLVKAQFRCPEDLKEEKSKAVWSRVDKNFAQGEALG--MSSVPPK-------------SIDSLLCMSY-VPDPSKFSFRVNTVPAYKHANREVVNLHDSEGKPIVESGYVLPEEAKATGKKGKAAFNVGKDCVIGDGVQIGVKTNIKKSV 383          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BB89_HYAAE)

HSP 1 Score: 77.4 bits (189), Expect = 7.610e-14
Identity = 52/160 (32.50%), Postives = 79/160 (49.38%), Query Frame = 0
Query:   10 QSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINREL 169
            +  R+V+    + + E L + K+LL+R     L T L D   Y+ +HWVL  L +++ I S++ +L+P LVRRQF+    G   L +   SV  +A    A+ A MS      D +             VRCFA  L    AYC +A T+ AY  ++ E+
Sbjct:   38 EENRVVLVSQAVHMNEHLDVAKSLLQRRSHFVLHTDLYDGHFYIFSHWVLDLLQEKKYIASIKADLIPHLVRRQFR----GANVLPE---SVRDKATSKQALAASMSLSEEQHDPEDL-----------VRCFAYVLP-SNAYCERADTIPAYRAMDEEV 178          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: NTP_transferase (domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZLT4_LOTGI)

HSP 1 Score: 80.1 bits (196), Expect = 1.090e-13
Identity = 56/214 (26.17%), Postives = 99/214 (46.26%), Query Frame = 0
Query:    4 DYVGLTQSGRLVIKLP-KLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEAL----------RGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINRE----LLTMREFSDKCPWSMPDGFRPKDSTLVGEGCHLG 202
            D++G  ++G+ V+ L  +  +E+ +  QK+ L+RH  + + + L D  +Y+   WV+ FL   + I +++ EL+P LVRRQF+ P      L   V     +              ++ +  +++W    +GD AD   G      VRC+A     G  +C +A TL  Y   NR+    L T+    +    S+      K+ + +G  C +G
Sbjct:  160 DFIGFDENGKRVLFLTSEADLEDTISFQKSTLKRHPFINIRSKLTDCHLYLFKKWVIDFLAQNQKICTIKGELIPYLVRRQFRRPKLPDTDLPGNVSLTQTDTKPDIHDFTSEDSNNSKILELTTWTDH-EGDMADCFHG----ESVRCYAHIQDDG--FCIRANTLGTYIEANRQIPKILSTLSSNKNTSIKSVHPSAIIKEKSQIGSDCIVG 366          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Bacterial (transferase hexapeptide repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYW1_ACACA)

HSP 1 Score: 79.3 bits (194), Expect = 2.070e-13
Identity = 69/222 (31.08%), Postives = 106/222 (47.75%), Query Frame = 0
Query:    3 IDYVGLTQSG-RLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRA-ITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINRELLTMR------EFSDKCPWSMPDG-FRPKDST----LVGEGCHLGPKGTLKFSV 211
            +DYVGL + G RL+       +E  +RI K LLR++ ++T+ T L D   Y+ +   L  L+ ++  I S++ EL+P LVR QF+   T  +   KR  S A            M+S R     DT D         ++RCFA T+  G  YCS+A T+ +Y  +N ++ +        E   K  +  P     PK       +VGEG  +G + ++K SV
Sbjct:  200 MDYVGLKEDGERLLYFKAAADIENKMRISKKLLRKNYSLTIHTNLVDAHFYIFSKAALAMLEARKEKIVSIKGELIPYLVRCQFRKAFTREDAPIKRPFSKA----------YSMTSARV----DTTD---------KIRCFAYTMEGG--YCSRANTIKSYVQMNLDIASRGACYSPLEPVTKNSYIHPAAVISPKTQVGAECVVGEGTRVGERASIKKSV 396          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: NTP_transferase (domain-containing protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=G5AAU1_PHYSP)

HSP 1 Score: 77.4 bits (189), Expect = 4.870e-13
Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = 0
Query:   10 QSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINREL 169
            +  R+V+    + + E L + K+LL+R     L T L D   Y+ +HWVL  L +++ I S++ +LVP LVRRQF+      E++ +R  S         A+ A +S      D +             VRCFA  L    AYC +A T+ AY  ++ E+
Sbjct:  169 EENRVVLVSQAVHMNEDLYVAKSLLKRRSNFVLHTDLYDGHFYIFSHWVLDLLQEKKYIASIKADLVPHLVRRQFRGAAALPESVRERATSK-------QALAASLSLSEEKHDPEDL-----------VRCFAYVLP-SNAYCERADTIPAYKAMDEEV 309          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU43_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.760e-13
Identity = 51/160 (31.87%), Postives = 79/160 (49.38%), Query Frame = 0
Query:   10 QSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINREL 169
            +  R+V+    + + E L + K+LL+R     L + L D   Y+ +HWVL  L +++ I S++ +LVP LVRRQF+    G + L K   SV  +A     + A +S      D +             VRCFA  L    AYC +A T+ AY  ++ E+
Sbjct:   99 EENRVVLVSQAVHMNEDLYVAKSLLKRRSNFVLHSDLYDAHFYIFSHWVLDLLQEKKYIVSIKADLVPHLVRRQFR----GADALPK---SVREKATCKQELAASLSLAEEKHDPEDL-----------VRCFAYVLPKN-AYCERADTIPAYKAMDEEV 239          
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Match: Translation (initiation factor eif-2b subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B3W1_PLAHL)

HSP 1 Score: 76.3 bits (186), Expect = 1.240e-12
Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 0
Query:   10 QSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVSVYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGSVAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGEAYCSQAKTLAAYCTINREL 169
            +  R+V+    + + E L + K+LL+R     L T L D   Y  +HWVL  L +++ I+S++ +LVP LVRRQF+    G E L   V   A        + A +S  +   D +             VRCFA  L    AYC +A T+ AY  +N E+
Sbjct:  168 EENRVVVASQAVHMNEDLYVAKSLLKRRSNFVLHTDLYDGHFYFFSHWVLDLLQEKKYISSIKVDLVPHLVRRQFR----GKEALPSNVREKAASKQE---LAASLSLSKEKHDPEDL-----------VRCFAYVLPPN-AYCERADTIPAYRAMNEEV 308          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9223.17398.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Eukaryotic1.560e-14497.16translation initiation factor 2B gamma subunit n=1... [more]
Eukaryotic1.560e-3539.47translation initiation factor 2B gamma subunit n=1... [more]
NTP_transferase3.210e-1734.12domain-containing protein n=1 Tax=Pythium brassicu... [more]
Hypothetical1.090e-1527.75protein n=1 Tax=Amorphochlora amoebiformis TaxID=1... [more]
Uncharacterized7.610e-1432.50protein n=1 Tax=Hyaloperonospora arabidopsidis (st... [more]
NTP_transferase1.090e-1326.17domain-containing protein n=1 Tax=Lottia gigantea ... [more]
Bacterial2.070e-1331.08transferase hexapeptide repeat-containing protein ... [more]
NTP_transferase4.870e-1331.25domain-containing protein n=8 Tax=Peronosporaceae ... [more]
Uncharacterized5.760e-1331.88protein n=2 Tax=Phytophthora kernoviae TaxID=32545... [more]
Translation1.240e-1232.50initiation factor eif-2b subunit n=1 Tax=Plasmopar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.10.10coord: 184..238
e-value: 3.7E-12
score: 47.8
NoneNo IPR availablePANTHERPTHR45989FAMILY NOT NAMEDcoord: 3..238
IPR001451Hexapeptide repeatPFAMPF00132Hexapepcoord: 192..225
e-value: 4.3E-4
score: 19.9
IPR011004Trimeric LpxA-like superfamilySUPERFAMILY51161Trimeric LpxA-like enzymescoord: 186..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9223contigEcto-sp9_F_contig9223:793..5380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9223.17398.1mRNA_Ecto-sp9_F_contig9223.17398.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9223 793..5380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9223.17398.1 ID=prot_Ecto-sp9_F_contig9223.17398.1|Name=mRNA_Ecto-sp9_F_contig9223.17398.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=239bp
QDIDYVGLTQSGRLVIKLPKLFVEEALRIQKALLRRHETVTLSTTLQDVS
VYVLAHWVLGFLDDQRAITSVQNELVPALVRRQFKNPITGGETLSKRVGS
VAGEALRGDAMVARMSSWRPSPDGDTADPGEGTPGVSEVRCFALTLRHGE
AYCSQAKTLAAYCTINRELLTMREFSDKCPWSMPDGFRPKDSTLVGEGCH
LGPKGTLKFSVIGQACKIGEKAKINNCIIMDGVTIGDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001451Hexapep
IPR011004Trimer_LpxA-like_sf