prot_Ecto-sp9_F_contig922.17394.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig922.17394.1
Unique Nameprot_Ecto-sp9_F_contig922.17394.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp9_F_contig922.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G959_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.000e-46
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 0
Query:    1 MMRYFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSIASSGACSTDDEEAHVVVDFNAVTLEGVELTGDCSDLYKQV 83
            MMR+FACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSI S GAC TDDEEA V+ +F+AVT EGVELTGDCSDLYKQV
Sbjct:    1 MMRFFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSITSYGACCTDDEEALVMANFSAVTPEGVELTGDCSDLYKQV 83          
BLAST of mRNA_Ecto-sp9_F_contig922.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.560e-35
Identity = 68/83 (81.93%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 MMRYFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSIASSGACSTDDEEAHVVVDFNAVTLEGVELTGDCSDLYKQV 83
            MMR FACLAALV T+V +SHPLCF DD+  DYDQVLTFCDNSIASSGAC TDDEEA VVVDFNAVT  G ELTGDC DLYKQV
Sbjct:    1 MMRSFACLAALVATQV-ASHPLCFIDDKPTDYDQVLTFCDNSIASSGACCTDDEEAQVVVDFNAVTPVGEELTGDCPDLYKQV 82          
BLAST of mRNA_Ecto-sp9_F_contig922.17394.1 vs.
Match: Glucose (sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 2.420e-34
Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 MMRYFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSIASSGACSTDDEEAHVVVDFNAVTLEGVELTGDCSDLYKQV 83
            MMR FACLAALVG KVV+SHPLCFFDDR  DY++VLTFCD SIA+ GAC TDDEE  V+ DF+ VT EGVELTGDCS+LYK+V
Sbjct:    1 MMRAFACLAALVGIKVVTSHPLCFFDDRPTDYNEVLTFCDTSIAAYGACCTDDEEVQVMKDFSGVTPEGVELTGDCSNLYKEV 83          
BLAST of mRNA_Ecto-sp9_F_contig922.17394.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K353_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 3.750e-28
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    2 MRYFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSIASSGACSTDDEEAHVVVDFNAVTLEGVELTGDCSDLYKQ 82
            MR +ACLAAL  TKV ++HPLC+FDDR  DYDQVLTFCDNSIA SGAC TD+EE  V  +F+A   EGV  + +C+ LYK+
Sbjct:    1 MRAYACLAALAATKV-AAHPLCYFDDRPTDYDQVLTFCDNSIAMSGACCTDEEEGQVEANFDAAFAEGVVPSSECAALYKE 80          
BLAST of mRNA_Ecto-sp9_F_contig922.17394.1 vs.
Match: Glucose (sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 6.340e-22
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 0
Query:    2 MRYFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSIASSGACSTDDEEAHVVVDFNAVTLEGVELTGDCSDLYKQV 83
            MR +ACLAAL  TKV ++HPLCF DD+  DYDQVLT+CDNSIA SGAC T++EE  V  +FNA    GV  +  C+ LYKQV
Sbjct:    1 MRAYACLAALAATKV-AAHPLCFIDDKPTDYDQVLTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQV 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig922.17394.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized1.000e-4687.95protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.560e-3581.93protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Glucose2.420e-3475.90sorbosone dehydrogenase n=1 Tax=Ectocarpus silicul... [more]
Uncharacterized3.750e-2862.96protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Glucose6.340e-2260.98sorbosone dehydrogenase n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.567

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig922contigEcto-sp9_F_contig922:3485..3896 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig922.17394.1mRNA_Ecto-sp9_F_contig922.17394.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig922 3485..3896 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig922.17394.1 ID=prot_Ecto-sp9_F_contig922.17394.1|Name=mRNA_Ecto-sp9_F_contig922.17394.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=83bp
MMRYFACLAALVGTKVVSSHPLCFFDDRQPDYDQVLTFCDNSIASSGACS
TDDEEAHVVVDFNAVTLEGVELTGDCSDLYKQV
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