prot_Ecto-sp9_F_contig9164.17353.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9164.17353.1
Unique Nameprot_Ecto-sp9_F_contig9164.17353.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length99
Homology
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 9.310e-56
Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRIL 93
            RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQ HQDGNGTVDSGHQCLAGRNR+IMLRRLDREEDKRAALRIL
Sbjct:  270 RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQCHQDGNGTVDSGHQCLAGRNRVIMLRRLDREEDKRAALRIL 362          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 8.260e-35
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAG 95
            +YLPE   +L+R  K+D+LP G RC ++H+P     FMGPNLYITPPG++T FHQDG+GTVDSGH CL GRN ++MLRRLD E +K  ALRIL G
Sbjct:   55 KYLPELQADLTRHLKLDLLPRGERCMLRHLPLNGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHLCLRGRNEVVMLRRLD-EPNKLRALRILNG 148          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.190e-33
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAGG 96
            ++LPE   +L R FK+D+LP G RC  +H+P     FMGPNLYITPPG++T FHQDG+GTVDSGHQCL GRN ++MLRR+D E +KR ALRIL  G
Sbjct:  644 KHLPELFCDLERNFKVDLLPRGRRCLFRHLPLRGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHQCLRGRNEVVMLRRMD-EPNKRHALRILCKG 738          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ01_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.400e-29
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    3 LPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILA 94
            LP  A +L+  + ++ LPAG+ C +Q +P + R FMGPNLY+TPPGS+T  H+DG GT+DSGHQ + G N +IMLRR+D E  KRAA+RI+A
Sbjct:   36 LPNLAADLAANYGIETLPAGSNCMLQALPEKGRPFMGPNLYVTPPGSFTWTHEDGRGTLDSGHQTITGYNEVIMLRRMD-EVGKRAAMRIMA 126          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFF2_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.430e-25
Identity = 52/94 (55.32%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    3 LPECANNLSREFKMD-ILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAG 95
            LP+   +L   FK+  ILP G+ C M  +    R FMGPNLYITPP S+T FHQDG+GTVDSGH CL+G N ++MLRRL  E  K  AL +L G
Sbjct:    1 LPKSFEDLQNNFKLSSILPGGSHCMMNAVNINGRPFMGPNLYITPPSSFTHFHQDGHGTVDSGHLCLSGYNEVVMLRRLP-ERHKCRALELLNG 93          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK00_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.320e-24
Identity = 52/96 (54.17%), Postives = 66/96 (68.75%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMD-ILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAG 95
            R +P    N    F++  +LP G+ C M  +  E+R FMGPNLY+TPP S+T FHQDG+GTVDSGH C++G N +IMLRRL  E  KR AL IL+G
Sbjct:  613 RLMPLLNENFLESFELSSVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGFNEVIMLRRLT-ERHKRHALWILSG 707          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: C2H2-type (domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGJ8_THAOC)

HSP 1 Score: 105 bits (263), Expect = 1.840e-24
Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:    1 RYLPECANNLSREFKM-DILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAGGEEA 99
            + LP+  ++L   F +  ILP G+ C M  +    R FMGPNLYITPP S+T FHQDG+GTVDSGH CL+G N ++MLRRL  E  K  ALR+L G  ++
Sbjct:  864 KLLPQSFDDLKNNFMLPSILPGGSHCMMNALNVNGRPFMGPNLYITPPASFTHFHQDGHGTVDSGHLCLSGYNEVVMLRRLT-ERHKYHALRLLTGASDS 962          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA)

HSP 1 Score: 105 bits (261), Expect = 3.390e-24
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMD-ILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAG 95
            + LP    +   +FKM   LP G  C M  +    R FMGPN+Y+TPPGS+T FHQDG+GTVDSGHQCL+G N ++MLRRL  E  K+ AL++L G
Sbjct:  698 KLLPPLYEDFINKFKMPGCLPGGIHCMMNSVNAGGRPFMGPNIYLTPPGSFTHFHQDGHGTVDSGHQCLSGYNEVVMLRRLT-ERHKQHALQLLRG 792          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRZ6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.590e-24
Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMD-ILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAG 95
            R +P   +N    F++  +LP G+ C M  +  E+R FMGPNLY+TPP S+T FHQDG+GTVDSGH C++G N ++MLRRL  E  K+ AL IL+G
Sbjct:  636 RLVPLLNDNFLESFELPAVLPGGSHCMMNSVTPEARPFMGPNLYVTPPASFTHFHQDGHGTVDSGHLCISGYNEVVMLRRLT-ERHKKHALWILSG 730          
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Match: RanBP2-type (domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCF4_THAPS)

HSP 1 Score: 104 bits (259), Expect = 6.250e-24
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 RYLPECANNLSREFKMD-ILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAG 95
            + LP+   +  R FK+  ILP G+ C M  +    R FMGPNLY+TPP S+T FHQDG+GTVDSGH C  G N ++MLRRL  E  K  ALR+L G
Sbjct:  597 KLLPQTYEDFRRNFKLPGILPGGSHCMMNAVNEGGRPFMGPNLYVTPPSSFTHFHQDGHGTVDSGHHCREGYNEVVMLRRLT-ERHKHHALRLLNG 691          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9164.17353.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
ATP-dependent9.310e-5697.85DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
Hypothetical8.260e-3562.11protein (Fragment) n=2 Tax=Dictyocha speculum TaxI... [more]
Hypothetical1.190e-3362.50protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical1.400e-2955.43protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014... [more]
Hypothetical2.430e-2555.32protein (Fragment) n=1 Tax=Skeletonema marinoi Tax... [more]
Uncharacterized1.320e-2454.17protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
C2H2-type1.840e-2452.00domain-containing protein n=1 Tax=Thalassiosira oc... [more]
Hypothetical3.390e-2453.13protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Uncharacterized4.590e-2452.08protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
RanBP2-type6.250e-2453.13domain-containing protein (Fragment) n=1 Tax=Thala... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9164contigEcto-sp9_F_contig9164:2090..3051 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9164.17353.1mRNA_Ecto-sp9_F_contig9164.17353.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9164 2090..3051 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9164.17353.1 ID=prot_Ecto-sp9_F_contig9164.17353.1|Name=mRNA_Ecto-sp9_F_contig9164.17353.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=99bp
RYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSW
TQFHQDGNGTVDSGHQCLAGRNRIIMLRRLDREEDKRAALRILAGGEEA
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