prot_Ecto-sp9_F_contig9111.17306.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9111.17306.1
Unique Nameprot_Ecto-sp9_F_contig9111.17306.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Matrin-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G993_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.820e-55
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  126 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 208          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Matrin-type (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUU5_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 5.540e-52
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM
Sbjct:  458 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 540          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NE02_HETAK)

HSP 1 Score: 138 bits (348), Expect = 2.370e-40
Identity = 64/83 (77.11%), Postives = 70/83 (84.34%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQEWRHAHGMRCLGIPNTKHFHDI  I+DA+ LYAK+K  LD + W+    EEYED EGNVLNRRTYEDLARQGL+
Sbjct:   62 RRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITTIEDAKALYAKLKAGLDGDAWDGAVEEEYEDSEGNVLNRRTYEDLARQGLL 144          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Q3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.040e-39
Identity = 66/83 (79.52%), Postives = 70/83 (84.34%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQEWRHAHGMRCLGIPNTKHFHDI LI+DA  L+ KIKD L  E WN +  EEYED EGNVLNRRTYEDLARQGL+
Sbjct:  232 RRAFDRHFQEWRHAHGMRCLGIPNTKHFHDITLIEDATALFDKIKDQLAGEMWNADMEEEYEDSEGNVLNRRTYEDLARQGLL 314          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: SF3A3 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TNG2_SYMMI)

HSP 1 Score: 139 bits (351), Expect = 4.470e-38
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQEWRHAHGMRCLG+PNTKHFHDI LI+DA  LY+KI+DSL KEQ+  +  EE+ED EGNVLNRRTYEDLARQGL+
Sbjct:  316 RRAFDRHFQEWRHAHGMRCLGVPNTKHFHDITLIEDALALYSKIRDSLKKEQFVEDVEEEFEDSEGNVLNRRTYEDLARQGLL 398          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Matrin-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE40_9STRA)

HSP 1 Score: 141 bits (355), Expect = 9.050e-38
Identity = 65/83 (78.31%), Postives = 72/83 (86.75%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQE+RHAHGMRCLGIPNTKHFHDI LIQDA DLYAK+K  L+ E W P+  EE+ED EGNVLN+RTYEDLARQGL+
Sbjct:  460 RRAFDRHFQEFRHAHGMRCLGIPNTKHFHDITLIQDAMDLYAKLKGKLEVEAWTPDVGEEFEDSEGNVLNKRTYEDLARQGLL 542          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6A8_GLOUD)

HSP 1 Score: 140 bits (352), Expect = 2.000e-37
Identity = 63/83 (75.90%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQEWRHA GMRCL IPNTKHFHDI L++DA  LY K+KD +D E WNPE+ EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  442 RRAFDRHFQEWRHAFGMRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDAENWNPENEEEFEDSEGNVLNRKTYEDLARQGLL 524          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: C2H2-type (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8G9_9STRA)

HSP 1 Score: 138 bits (348), Expect = 7.910e-37
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQEWRHA GMRCL IPNTKHFHDI L++DA  LY K+KD +D E WNPE+ EE+ED EGNVLNR+T+EDLARQGL+
Sbjct:  447 RRAFDRHFQEWRHAFGMRCLKIPNTKHFHDITLMRDAIQLYEKLKDQIDTENWNPENEEEFEDSEGNVLNRKTFEDLARQGLL 529          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: C2H2-type (domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU83_PYTIN)

HSP 1 Score: 139 bits (349), Expect = 2.420e-36
Identity = 62/83 (74.70%), Postives = 71/83 (85.54%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQ+WRHAHGMRCLGIPNTKHFHDI  +QDA  LY K+KD +D+E WN E  EE+ED EGNVL+R+TYEDLARQGL+
Sbjct: 2155 RREFDRHFQQWRHAHGMRCLGIPNTKHFHDITGMQDAIALYEKLKDQIDQENWNAEKEEEFEDSEGNVLSRKTYEDLARQGLL 2237          
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7B4_PYTOL)

HSP 1 Score: 136 bits (343), Expect = 3.930e-36
Identity = 61/83 (73.49%), Postives = 69/83 (83.13%), Query Frame = 0
Query:    1 RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDKEQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM 83
            RR FDRHFQ+WRHAHGMRCLGIPNTKHFHDI L++DA  LY K+K  +D E WN    EE+ED EGNVLNR+TYEDLARQGL+
Sbjct:  443 RREFDRHFQQWRHAHGMRCLGIPNTKHFHDITLMRDAIALYEKLKTEIDAESWNATTEEEFEDSEGNVLNRKTYEDLARQGLL 525          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9111.17306.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Matrin-type1.820e-55100.00domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Matrin-type5.540e-52100.00domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical2.370e-4077.11protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical2.040e-3979.52protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
SF3A34.470e-3878.31protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Matrin-type9.050e-3878.31domain-containing protein n=1 Tax=Tribonema minus ... [more]
Uncharacterized2.000e-3775.90protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
C2H2-type7.910e-3774.70domain-containing protein n=1 Tax=Pythium brassicu... [more]
C2H2-type2.420e-3674.70domain-containing protein n=1 Tax=Pythium insidios... [more]
Uncharacterized3.930e-3673.49protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024598Domain of unknown function DUF3449PFAMPF11931DUF3449coord: 1..82
e-value: 1.3E-32
score: 113.1
IPR031776Splicing factor 3A subunit 3PANTHERPTHR12786:SF2SPLICING FACTOR 3A SUBUNIT 3coord: 1..83
NoneNo IPR availablePANTHERPTHR12786SPLICING FACTOR SF3A-RELATEDcoord: 1..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9111contigEcto-sp9_F_contig9111:4781..5443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9111.17306.1mRNA_Ecto-sp9_F_contig9111.17306.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9111 4781..5443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9111.17306.1 ID=prot_Ecto-sp9_F_contig9111.17306.1|Name=mRNA_Ecto-sp9_F_contig9111.17306.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=84bp
RRNFDRHFQEWRHAHGMRCLGIPNTKHFHDIVLIQDARDLYAKIKDSLDK
EQWNPEDNEEYEDGEGNVLNRRTYEDLARQGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024598DUF3449
IPR031776SF3A3