prot_Ecto-sp9_F_contig9102.17291.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9102.17291.1
Unique Nameprot_Ecto-sp9_F_contig9102.17291.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length805
Homology
BLAST of mRNA_Ecto-sp9_F_contig9102.17291.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ2_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 6.140e-122
Identity = 537/756 (71.03%), Postives = 541/756 (71.56%), Query Frame = 0
Query:   66 SRKRKTSDDQGSGPQRGEDLPGAAAA--VPKDAAGGENGKNGTGTGADKDKADDAGGSDSSDDLVITQPRPKRARTSSEGGGLAHXXXXXXXXXXXXXXXXXXXXSRQRVANAXXXXXXXXXXXXPATRGKNGADXXXXXXXXXXXXXXXXXXXXXXXXXSRSGEKEGPLTAEKXXXXXXXXXRLQARRR----GRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXXAKLGGTPVKSASKGWTCQGCYVRVYDMDLKACDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPGMPGTAAATVGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTFSFGPSTPAAPAATPGSPAPTAAXXXXXXXXXXXXXXXXXXXXVSSAAAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGATXXXS-------AGXXXXXXXXXXXXXTAAFTFGGAXXXXXXXXXXXXXXXXXXXXXXXXX-----ATKTIGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTAPPAAAQAPGXXXXXXSTFTFG---AKPAVGAXXXXXXXTKTLFGGAAPAAXXXXXXXTKTPGVPAFSFGAT--APXXXXXXXXXXXXXXXXIASRLGPAPTAAGLAAPKPSPATTGFGXXXXXXAPAGXXXXXXXTKRASSPAVSAGFGVAQQPPRGPSPATSAFGAAGA 798
            SRKRKTSDDQGSGPQRGEDLPGAAAA  VPKDAAGGENGKNGTGTGAD DKADDAGGSDSSDDL I QPRPKRARTSSEGGG+AH                    SRQRVANA            PATRGK GAD           XXXXXXX X XXXX              XXXXXXXXX           GRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXXAKLGGTPVKSASKGWTCQGCYVRVYDMDLKACDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPG+PGTAAATVGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RVTFSFGPSTPAA             XXXXXXXXXXXXXXXXXXXXVSSAAAKTA       XXXXXXXXXXXXXXXXXXXXX      XXX        AG XXXXXXXXXXXX AAFTFG A   XXXXXXXXXXXXXXXXXXXXXX     A KTIGA                      XXXXXXXXXXXXXXXXXXXXX       XXXXXXX              XXXXXX         A+PAVGA  XXXXX  T+        XXXXXX TKTPGVPAFSFGAT  AP    XXXX        IASRLGPAPTAA LAAPKPS       XXXXXX    XXXXXXXTKRASSPAVSAGFGVAQQPPRGPSPATSAFGAAGA
Sbjct:  779 SRKRKTSDDQGSGPQRGEDLPGAAAAAAVPKDAAGGENGKNGTGTGADMDKADDAGGSDSSDDLAIVQPRPKRARTSSEGGGVAHPSSGTPTSAGDGKSGPSPAESRQRVANASSSPVAAGPAASPATRGKGGADNSGGGVDKAGAXXXXXXXRXNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXXAKLGGTPVKSASKGWTCQGCYVRVYDMDLKACDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPGVPGTAAATVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVTFSFGPSTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSAAAKTAPSSVSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGSXXXXXXXXXXXXXAAFTFGRAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKTIGAAAGTDGATPAAAPAPTPGFTFGXXXXXXXXXXXXXXXXXXXXXASGLAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPAVGAGAXXXXXXXTVXXXXX-XXXXXXXXTTKTPGVPAFSFGATTTAPAAAAXXXXSAAGGPGGIASRLGPAPTAACLAAPKPS-TXXXXXXXXXXXXXXXXXXXXXXTKRASSPAVSAGFGVAQQPPRGPSPATSAFGAAGA 1532          
BLAST of mRNA_Ecto-sp9_F_contig9102.17291.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF3_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 4.380e-119
Identity = 569/756 (75.26%), Postives = 570/756 (75.40%), Query Frame = 0
Query:   52 PAPAEESSPKAAPGSRKRKTSDDQGSGPQRGEDLPGAAAAVPKDAAGGENGKNGTGTGADKDKADDAGGSDSSDDLVITQPRPKRARTSSEGGGLAHXXXXXXXXXXXXXXXXXXXXSRQRVANAXXXXXXXXXXXX--PATRGKNGADXXXXXXXXXXXXXXXXXXXXXXXXXSRSGEKEGPLTAEKXXXXXXXXXRLQARRRGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXXAKLGGTPVKSASKGWTCQGCYVRVYDMDLKACDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPGMPGTAAATVGAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTFSFGPSTPAAPAATPGSPAPTAAXXXXXXXXXXXXXXXXXXXXVSSAAAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGATXXXSAGXXXXXXXXXXXXXTAAFTFGGAXXXXXXXXXXXXXXXXXXXXXXXXXATKTIGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA--GTAPPAAAQAPGXXXXXXSTFTFGAKPAVGAXXXXXXXTKTLFGGAAPAAXXXXXXXTKTPGVPAFSFGATAPXXXXXXXXXXXXXXXXIASRLGPAPTAAGLAAPKPSPATTGFGXXXXXXAPAGXXXXXXXTKRASSPAVSAGFGVAQQPPRGPSPATSAFGAAGATGFGG 803
            PAPAEESSPKAAPGSRKRKTSD                                               SDSSDDL ITQPRPKRARTSSEGG    XXXXXXXXXXXXXXXXXXXX        XXXXX         PATRGK GAD      XXXXXXXXXXXXXXXXXXX                XXXXXXXRLQARRRGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXXAKLGGTPV+SASKGWTCQGCYVRVYDMDLK CDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPGMPGTAA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RVTFSFGPSTPAA             XXXXXXXXXXXXXXXXXXXXVSSAAAKTA       XXXXXXXXXXXXXXXXXXXXXAAGGAT   SAGXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXX TKTIGA      XXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXX    GT PPAAAQAPG      STFTFGAKPAVGAXXXXXXX            XXXXXX TKT GVPAFSFGATAP   X XXXXXX     IASRLGPAPTAAGLAAPKPSPATTGFGXXXXXXAPAGXXXXXXXTKRASSPAVS GFGVAQQP RG SPATSAF A GATGF G
Sbjct:   75 PAPAEESSPKAAPGSRKRKTSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSSDDLAITQPRPKRARTSSEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAAGPAASPATRGKGGADKADKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXRLQARRRGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGXXXXXXXXAKLGGTPVRSASKGWTCQGCYVRVYDMDLKVCDMCRRPRNFGTPSFKNPPAVLPGGRTLYTVRAGLEAAGLASPGMPGTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVTFSFGPSTPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSAAAKTAPSSVSTVXXXXXXXXXXXXXXXXXXXXXAAGGATGSSSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKTIGAAAGTDGXXXXXXXXXXXXXXXXXXXXXXXXXPSFTAAAXXXXXXXXXXXXXXXXXXXXXXXGTTPPAAAQAPGAAAATPSTFTFGAKPAVGAXXXXXXXXXXXXXXXX-XXXXXXXXTTKTLGVPAFSFGATAPAAAXPXXXXXXGGSGGIASRLGPAPTAAGLAAPKPSPATTGFGXXXXXXAPAGXXXXXXXTKRASSPAVSTGFGVAQQPTRGESPATSAFCAFGATGFAG 826          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9102.17291.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized6.140e-12271.03protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.380e-11975.26protein (Fragment) n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9102contigEcto-sp9_F_contig9102:340..4298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9102.17291.1mRNA_Ecto-sp9_F_contig9102.17291.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9102 340..4298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9102.17291.1 ID=prot_Ecto-sp9_F_contig9102.17291.1|Name=mRNA_Ecto-sp9_F_contig9102.17291.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=805bp
RKSYGGGGGGGGDDAPVVASNGGGSATRQHQAAAAAAVSGGKGSGADKAA
APAPAEESSPKAAPGSRKRKTSDDQGSGPQRGEDLPGAAAAVPKDAAGGE
NGKNGTGTGADKDKADDAGGSDSSDDLVITQPRPKRARTSSEGGGLAHPS
SSTPTAAGGGKSGPSSAESRQRVANASSSPVAAGPAASPATRGKNGADSS
GGGVDKAGAAAATSGGRADGGGGSRSGEKEGPLTAEKEKDKEEEERRLQA
RRRGRHARSPYLHGGTGGRIDPSGGLPTSVRPVALALGGGGGGGGGAKLG
GTPVKSASKGWTCQGCYVRVYDMDLKACDMCRRPRNFGTPSFKNPPAVLP
GGRTLYTVRAGLEAAGLASPGMPGTAAATVGAVATATATATAKTASGATT
TAAAATAAAATPASARPTPSKPRVTFSFGPSTPAAPAATPGSPAPTAAAA
PKPSPGPAFSFGGGGGSGVSSAAAKTAPSSVSTAPAAAAAPAGNPAPGPA
FSFGAAAGGATGSSSAGSAAAAAAAAPAAPTAAFTFGGAAPAAAAAAAAT
AATASTPAITTTTTATKTIGAAAGTEGATPAAAPAPTAGFTFGAAAPAAA
PSSTAAAAPAPASGLAAKFTFGVAAPAPAAGTAPPAAAQAPGAAAATPST
FTFGAKPAVGAGAAAAAPTKTLFGGAAPAAAAAGTATTKTPGVPAFSFGA
TAPAAAAPAAPAAAGGSGGIASRLGPAPTAAGLAAPKPSPATTGFGGFGG
FGAPAGGGGGGGGTKRASSPAVSAGFGVAQQPPRGPSPATSAFGAAGATG
FGGAA
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