prot_Ecto-sp9_F_contig9100.17289.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9100.17289.1
Unique Nameprot_Ecto-sp9_F_contig9100.17289.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9100.17289.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G564_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 5.710e-42
Identity = 73/87 (83.91%), Postives = 78/87 (89.66%), Query Frame = 0 
Query:   52 PQDPSRSASRGGVVFFGVAEACCTLCTRLEGCVGWSNTVKPDTASIDGKKKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYLA 138
            P+      S GGVVF+G+AEACCTLCTR EGCVGWSNTVKPD A+IDG+KKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYLA
Sbjct:  147 PEGSVEMGSVGGVVFYGLAEACCTLCTRWEGCVGWSNTVKPDIATIDGEKKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYLA 233
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9100.17289.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 5.460e-41
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   65 VFFGVAEACCTLCTRLEGCVGWSNTVKPDTASIDGKKKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYLA 138
            +FFGVAEACCTLCTRLEGCVGWSNTVKPD ASIDG KKCVLYSSVSGPPVEDKAMNRAITSG+PRDEESMMYLA
Sbjct:    1 MFFGVAEACCTLCTRLEGCVGWSNTVKPDIASIDGTKKCVLYSSVSGPPVEDKAMNRAITSGIPRDEESMMYLA 74
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9100.17289.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ9_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 5.080e-39
Identity = 70/87 (80.46%), Postives = 75/87 (86.21%), Query Frame = 0 
Query:   52 PQDPSRSASRGGVVFFGVAEACCTLCTRLEGCVGWSNTVKPDTASIDGKKKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYLA 138
            P+      S G VVF+G+AEACCTLCTR EGCVGWSNTVK D A IDGKK+CVLYSSVSGPPVEDKAMNRAITSG+PRDEESMMYLA
Sbjct:  216 PEGSVEMGSVGSVVFYGLAEACCTLCTRWEGCVGWSNTVKFDIAPIDGKKRCVLYSSVSGPPVEDKAMNRAITSGIPRDEESMMYLA 302
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9100.17289.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ7_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.290e-19
Identity = 44/72 (61.11%), Postives = 51/72 (70.83%), Query Frame = 0 
Query:   66 FFGVAEACCTLCTRLEGCVGWSNTVKPDTASIDGKKKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYL 137
            F+G  E CCTLCTR EGCV WS T  P  A ++G + CVLYSSV+  PVEDK + RA+ SG PR EESM YL
Sbjct:   10 FYGNFEGCCTLCTRREGCVAWSATDDPSKALVNGSR-CVLYSSVTRQPVEDKQLKRAVRSGTPRAEESMTYL 80
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9100.17289.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized5.710e-4283.91protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.460e-4194.59protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.080e-3980.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.290e-1961.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.4.10coord: 64..133
e-value: 2.0E-5
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9100contigEcto-sp9_F_contig9100:1971..3816 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9100.17289.1mRNA_Ecto-sp9_F_contig9100.17289.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9100 1971..3818 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9100.17289.1 ID=prot_Ecto-sp9_F_contig9100.17289.1|Name=mRNA_Ecto-sp9_F_contig9100.17289.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=138bp
RLRRLWRAGVLGPWSSHRPWKACTPSPPLYSIGKVVLIRTPKCATKWPVN
TPQDPSRSASRGGVVFFGVAEACCTLCTRLEGCVGWSNTVKPDTASIDGK
KKCVLYSSVSGPPVEDKAMNRAITSGVPRDEESMMYLA
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