prot_Ecto-sp9_F_contig9035.17227.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9035.17227.1
Unique Nameprot_Ecto-sp9_F_contig9035.17227.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length271
Homology
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB3_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 5.350e-189
Identity = 265/271 (97.79%), Postives = 267/271 (98.52%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVRRFCV 271
            GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSG+GPSKRLNAEQQRLVASPMKELDT+LALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFAT ILEGADGHK R  CV
Sbjct:  176 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATSILEGADGHKGRVVCV 446          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: DNA (polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI6_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.810e-71
Identity = 141/329 (42.86%), Postives = 184/329 (55.93%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP-PVPPSPSKK-------------VGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELL---SGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLH---------------------------------------------PCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPAC--LRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHK 265
            G+V+AV+G+V A G+M V+ WCP G+PP P PP  +                GG  DPL   L +D +AGYLGG  D E   AR+ RV+VCG+S       L    SGS  S +L+AEQQR   +P++E D  LA +A   PVD+MP  SD +NY LPQ+  H                                             PCLL  ASR+   +  TNPHEA +G R+ LG++GQPL D+ +YT     A  D   +   L+ LE ML+W+H+APTAP+TLGCYPF+TEDPFV+EECP +FFAGNQP+FAT ++EG DG +
Sbjct:  175 GIVVAVRGSVRADGDMAVEAWCPPGLPPQPSPPEGAAHPPGACLLLVSGMLAGGPQDPLPTRLFLDHLAGYLGGAGDHE-QIARVVRVVVCGNSAXXXXXXLAGAASGSIGSGKLSAEQQRERTAPLRECDAELAQVAV--PVDIMPSASDASNYMLPQRAAHMLFRKRAIQQRKGNIRPNVAAAXXXXXXXXXXXXXXXXXXXXXXHPCLLPLASRYPNARLATNPHEAWVGTRLVLGTAGQPLDDILQYTAAAEGAGGDEGDSARRLQMLENMLRWQHIAPTAPDTLGCYPFLTEDPFVLEECPHVFFAGNQPRFATRLVEGHDGQQ 500          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: DNA (polymerase delta regulatory subunit 55 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IIY7_KLENI)

HSP 1 Score: 223 bits (569), Expect = 5.510e-67
Identity = 127/284 (44.72%), Postives = 169/284 (59.51%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP-PV-PPSPSKKVGGRH---------------DPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVR 267
            G+V+AV G   A GE  V+      +PP P+ PP+P+  V                   DPL   LLVD + G+LGG + Q+  SAR  RV++ GDS+ AP  +LL+G      L+A +Q    +P++ELD +L  LAAA PVDVMPG +DPANY+LPQQPLHPCL   AS++      TNPH   +    FLG++GQP+ D+ RY   +           L  LE  L+WRH+APTAP+TL CYPF   DPF++  CP ++FAGNQ  FAT +L+G DG +VR
Sbjct:  138 GVVVAVLGVEQADGEFAVEAVLLPDLPPQPLRPPAPAAGVAPPRYVALVSGLGVGAPGVDPLQTQLLVDHLGGHLGGSQAQQ-LSARTVRVVLAGDSLHAPP-DLLTGQA----LSAREQAAAVAPIQELDLLLTQLAAALPVDVMPGSTDPANYSLPQQPLHPCLFPGASQYDTFSAATNPHRFSVDGVDFLGTAGQPVADLLRYCGRDDP---------LALLESTLRWRHLAPTAPDTLACYPFTDSDPFLLATCPAVYFAGNQAAFATTLLQGTDGQRVR 406          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWT2_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.690e-66
Identity = 131/305 (42.95%), Postives = 169/305 (55.41%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPP-------VPPSPSKK--------------VGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAA-PSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADK-------------DAKPAC-----LRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHK 265
            GL  AV G + A GE +V+DWC  G+PPP       V P    +               GG  DP+  ++LVDFVAG LGG  D+    A I RVI+ G+S+A     E L      K L A  Q  +A P+ +LD +LA LA+A PVDVMPG  D ++  +PQQP H  LL  A R+ +L+R  NP+EA +  R+ LGSSGQP+ D+ ++T P A   K             +A+ A      L  LE ML WRHMAPTAP+TL CYPF  EDPFV+E CP +FFAGNQ  F   +++   G K
Sbjct:  170 GLTAAVLGVMGADGEFVVEDWCVPGVPPPLENTNGAVAPKAEPEGDEGPYLLLASGLGFGGATDPMPAAMLVDFVAGRLGGAADRSDVGANICRVILAGNSMAPLQDGERLR----DKNLPAADQERIAGPLYQLDAMLAQLASACPVDVMPGADDASSVAMPQQPFHRSLLPTACRYSSLQRPPNPYEALVEGRLVLGSSGQPVTDLLKFTRPAAPKPKGENDDGDDEGNATEAEGAAAADFTLSALERMLGWRHMAPTAPDTLPCYPFYNEDPFVLEHCPQVFFAGNQKAFGQRLIDAPGGGK 470          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: Uncharacterized (protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KWA5_PHYPA)

HSP 1 Score: 218 bits (554), Expect = 9.760e-65
Identity = 113/283 (39.93%), Postives = 170/283 (60.07%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSK-----------KVGGRH-DPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVRRFCV 271
            G+V+A+ G     GE  V+D   AG+PP  P   S            K+GG   +PL + LLVD + G+LG V++Q   S++I R+++ G S+     +L +     + ++A+ Q  +  P+KELD  L  ++AA PVD+MPG +DPAN++LPQQPLH CL   A+ +      TNPH+ ++ + +FLG+SGQ + D+++Y+  E   D          +E  L WRH+APTAP+TLGCYPF+  DPF++E CP ++F GNQP +A+ +L G    KVR  C+
Sbjct:  145 GVVVAIVGREEKDGEFFVEDVMVAGLPPQKPLKNSDVDKFVLFVSGLKIGGHGTNPLDLQLLVDHLTGHLGEVQEQS-LSSQIVRMVIAGGSL-----DLQTSISNGQPMSAKNQSKLVEPVKELDLALTQISAAMPVDIMPGANDPANFSLPQQPLHKCLFPGATMYNTFVSATNPHQFELDDVLFLGTSGQNIDDLSKYSEAEDRLDF---------MERTLMWRHLAPTAPDTLGCYPFIDRDPFILETCPHVYFCGNQPHYASRLLTGPSAQKVRLVCI 412          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: Uncharacterized (protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LLG4_PICSI)

HSP 1 Score: 218 bits (554), Expect = 1.050e-64
Identity = 122/286 (42.66%), Postives = 171/286 (59.79%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP--PVPPSPSKK------------VGG-RHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVRRFCV 271
            G+V A+ G   + G+  V     AG+PP  P+    S K            VG  + +PL   LLVD+V G+ G  E ++  +A+I RVI+ GDSV    + LL+G      L  ++QR +A P+KELD  L  LAAA PVD+MPG +DPAN++LPQQPLH CL   AS +      TNPH+  +    FLG+SGQ + D+ +Y+  + + D          +E  LKWRH+APTAP+TLGCYPF   DPFV+E+CP ++F GNQ ++A+ +LEG++G  VR  C+
Sbjct:  145 GVVAALHGKEGSDGDFYVQSILEAGLPPQHPLHSGYSLKDNKYIVLVSGLMVGSMKSNPLQFQLLVDYVTGHSGD-EQEQSMAAQIVRVIIAGDSVDMQQS-LLAGQS----LGLKEQRRLAEPIKELDLALTQLAAAMPVDIMPGPNDPANFSLPQQPLHKCLFSGASAYNTFVSATNPHQFDLDGVCFLGTSGQNIDDLGKYSDAKEKLDY---------MERTLKWRHLAPTAPDTLGCYPFTDRDPFVIEDCPHVYFCGNQKKYASRLLEGSEGQVVRLVCI 415          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: DNA (polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C6)

HSP 1 Score: 216 bits (551), Expect = 2.600e-64
Identity = 116/286 (40.56%), Postives = 170/286 (59.44%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSKKVG---------------GRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVRRFCV 271
            G+V+A+ G  T +G+ LV+D   AG+PP +   P  K+G                  +PL V LLVD + G+LG  E ++  +A+I +V++ GDSV  P  ELL+G    + L  + Q  ++ P+KE+D +L  +AA+ P+D+MPG +DP+N+ +PQQPLH CL  +++ +   K  TNPH  ++    FLG+SGQ + D  +Y+    E +          LE  LKWRH+APTAP TLGCYPF   DPF VE CP ++FAGNQ +F T ++ G+DG  VR   +
Sbjct:  143 GIVVALHGKETGAGDFLVEDVLEAGLPPQL--DPPNKLGEDKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGD-EKEQNNAAQIVQVVIAGDSVEIPR-ELLNG----QNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFPSSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFEKYSEGSEEVEF---------LERTLKWRHIAPTAPNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRLITGSDGQVVRLISI 411          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: DNA (polymerase delta small subunit isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PIE3_9MAGN)

HSP 1 Score: 216 bits (549), Expect = 1.600e-63
Identity = 120/284 (42.25%), Postives = 169/284 (59.51%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP--PVPPSPSK----------KVGGRH-DPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVRRFCV 271
            GLV+A+ G  T+ G+  V D   AG+ P  P+P    +           VG    +PL + LLVD + G+LG  ++Q   +++I RV++ G+SV  P   LL+G    + L ++ Q  +  P KELD  L  LAAA PVD+MPG  DPANY+LPQQPLH CL   AS +      TNPH  ++    FLG+SGQ + D+ +Y+  + + D          LE  L WRH+APTAP TLGCYPF+ +DPF++E CP ++F GNQ ++ T +L+G++G KVR  CV
Sbjct:  190 GLVVALHGKETSDGDFFVQDILEAGLAPQKPLPLGSDEDKYVVFVSGLSVGSSESNPLQIQLLVDHMTGHLGDAKEQN-IASQIVRVVIVGNSVNVP-VRLLTG----QNLASKDQSKLFEPFKELDIFLTQLAAALPVDIMPGSDDPANYSLPQQPLHRCLFPGASAYNTFVSCTNPHSFELDTVRFLGTSGQNIDDLDKYSDAKNKLDF---------LERTLHWRHLAPTAPNTLGCYPFIDKDPFLIESCPHVYFIGNQSKYETRLLQGSEGQKVRLICV 458          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: Uncharacterized (protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF810B5)

HSP 1 Score: 212 bits (539), Expect = 2.030e-63
Identity = 116/284 (40.85%), Postives = 173/284 (60.92%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPP----PVPPSPSKKV---------GGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILEGADGHKVRRFCV 271
            G+V+A+ G  T +G+ LV D   AG+PP    P+  S  K V             +PL   LLVD + G+LG  E ++G +A+I   +V GDS+  P   LL+G    + L ++ Q  ++ P+KELD +L  +AA+ P+D+MPG +DPAN++LPQQPLH CL   +S +   +  TNPH  ++    FLG+SGQ + D+ +Y+  EA+ DK      +  +E  L+WRH+APTAP TLGCYPF   DPF +E CP ++F GNQ ++ T +++G++G  VR  C+
Sbjct:   63 GIVVALHGKETDAGDFLVQDVLEAGLPPQIELPLKSSEDKYVVFVSGLSVGSSTSNPLRFQLLVDHITGHLGD-EKEQGIAAKIVHFVVAGDSIEIPRG-LLNG----QNLASKDQSRLSEPIKELDILLTQIAASLPLDIMPGPNDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNVNDLEKYS--EAK-DK------IEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQNEYKTDLIKGSEGQFVRLICI 331          
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYY3_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.560e-63
Identity = 124/301 (41.20%), Postives = 172/301 (57.14%), Query Frame = 0
Query:    1 GLVIAVKGTVTASGEMLVDDWCPAGIPPP--------------------------VPPSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNAEQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPAC--LRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATGILE-----GADGHKVRR 268
            GLV+A KG     G   V+D C AG+P                            V      ++  R D L + LL+D+V G+ G  +++    +RIGRVIV GD +A   A +L      K + ++QQ   A P K +D VLA LA+A PVDVMPG  DP+N+TLPQQP+HPC+L +ASR+ + K V NP+EA +  R+FLG++GQ   D+AR T P +     A  A   L  +E+ L WRH+APTAP+TL CYPF  +DPFV+   P ++FAGNQP FA  ++E     GA+G + ++
Sbjct:  195 GLVVAAKGRAVG-GRFFVEDVCAAGMPEQEAGPEGXXXXXXXXXXXGGRGREPQYVMLMSGLRLSDRSDLLPLQLLIDYVQGHAGTADEKRRLVSRIGRVIVAGDLLAPFEASILK----EKHMTSKQQEEFALPFKHVDLVLAQLASAVPVDVMPGADDPSNHTLPQQPIHPCILPHASRYASFKTVPNPYEAWLQRRLFLGNAGQIPADLARSTAPPSLPSSPASSAARTLDLMEKTLHWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFAGNQPAFAARLVEEGKEGGAEGKEGKK 490          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9035.17227.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.350e-18997.79protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB3... [more]
DNA2.810e-7142.86polymerase alpha/epsilon subunit B-domain-containi... [more]
DNA5.510e-6744.72polymerase delta regulatory subunit 55 n=1 Tax=Kle... [more]
Hypothetical3.690e-6642.95protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized9.760e-6539.93protein n=3 Tax=Physcomitrium patens TaxID=3218 Re... [more]
Uncharacterized1.050e-6442.66protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=... [more]
DNA2.600e-6440.56polymerase delta small subunit n=1 Tax=Daucus caro... [more]
DNA1.600e-6342.25polymerase delta small subunit isoform X1 n=1 Tax=... [more]
Uncharacterized2.030e-6340.85protein n=1 Tax=Carya illinoinensis TaxID=32201 Re... [more]
Uncharacterized4.560e-6341.20protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 43..255
e-value: 1.6E-37
score: 128.9
NoneNo IPR availableGENE3D3.60.21.50coord: 36..271
e-value: 2.0E-80
score: 272.3
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 1..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9035contigEcto-sp9_F_contig9035:46..5156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9035.17227.1mRNA_Ecto-sp9_F_contig9035.17227.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9035 46..5156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9035.17227.1 ID=prot_Ecto-sp9_F_contig9035.17227.1|Name=mRNA_Ecto-sp9_F_contig9035.17227.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=271bp
GLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSKKVGGRHDPLLVSLL
VDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGSGPSKRLNA
EQQRLVASPMKELDTVLALLAAAAPVDVMPGESDPANYTLPQQPLHPCLL
RNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDA
KPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQ
PQFATGILEGADGHKVRRFCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR024826DNA_pol_delta/II_ssu