prot_Ecto-sp9_F_contig8973.17169.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8973.17169.1
Unique Nameprot_Ecto-sp9_F_contig8973.17169.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Match: EsV-1-170 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.370e-11
Identity = 41/71 (57.75%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFE---HAKQVFVSGDS----GAFKEVKDTCTAG-HMNHVF 63
            MQRRRKL T+SLFYTLTKCCIQERGVAH+LR E   ++ Q   S       GAFKEV      G H   VF
Sbjct:   21 MQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVF 91          
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Match: EsV-1-155 ((Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.390e-11
Identity = 41/71 (57.75%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFE---HAKQVFVSGDS----GAFKEVKDTCTAG-HMNHVF 63
            MQRRRKL T+SLFYTLTKCCIQERGVAH+LR E   ++ Q   S       GAFKEV      G H   VF
Sbjct:   21 MQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVF 91          
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Match: EsV-1-170 (n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 58.5 bits (140), Expect = 2.000e-8
Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = 0
Query:    1 MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFE---HAKQVFVSGDS----GAFKEVKDTCTAG-HMNHVF 63
            MQRRRK+ T+SLFYTLT+CC+Q RGV HVL+ E   ++ Q   S       GAFKEV      G H   VF
Sbjct:   21 MQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVF 91          
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Match: DDE_Tnp_1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 5.300e-8
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFE----HAKQVFVSGDS---GAFKEVKDTCTAG-HMNHVF 63
            MQRRRKL T+S+FYT+TKCC +ERGV+HVL+ E     ++ V ++      GAFKEV      G H   +F
Sbjct:   21 MQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIF 91          
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Match: DDE_Tnp_1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 9.900e-8
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    1 MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFE---HAKQVFVSGDS----GAFKEVKDTCTAG-HMNHVF 63
            +QRRRK+ T+SLF+TLT+CC+Q RGV+HVL+ E   ++ Q   S       GAFKEV      G H   VF
Sbjct:   36 IQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVF 106          
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 4.570e-7
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFE---HAKQVFVSG----DSGAFKE 49
            +QRRRK+ T+SLFYTLTK CIQERGV H+LR +   ++ Q   S      +GAFKE
Sbjct:  175 IQRRRKIDTSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8973.17169.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
EsV-1-1701.370e-1157.75n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
EsV-1-1551.390e-1157.75(Partial) (Fragment) n=1 Tax=Ectocarpus siliculosu... [more]
EsV-1-1702.000e-850.70n=2 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]
DDE_Tnp_15.300e-847.89domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
DDE_Tnp_19.900e-847.89domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized4.570e-755.36protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8973contigEcto-sp9_F_contig8973:5302..5499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8973.17169.1mRNA_Ecto-sp9_F_contig8973.17169.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8973 5299..5678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8973.17169.1 ID=prot_Ecto-sp9_F_contig8973.17169.1|Name=mRNA_Ecto-sp9_F_contig8973.17169.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=66bp
MQRRRKLTTNSLFYTLTKCCIQERGVAHVLRFEHAKQVFVSGDSGAFKEV
KDTCTAGHMNHVFLQ*
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