prot_Ecto-sp9_F_contig8973.17168.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8973.17168.1
Unique Nameprot_Ecto-sp9_F_contig8973.17168.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length314
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8973.17168.1 vs.
Match: hypothetical (protein n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E5A)

HSP 1 Score: 279 bits (714), Expect = 1.560e-89
Identity = 208/341 (61.00%), Postives = 221/341 (64.81%), Query Frame = 0 
Query:    1 MSDGCGEDLLDELLLLDSG-----------SFDIPEAFGTTAEDDTAATPGPSFDDGVFDINNASGLFDXXXXXXXXXXAMPRKPSSLAAAG-SGAXXXXXXXXXXXXX--------APGAATASGEDEA----RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQTSSSSSSSHGFIDDDTEKDVVHTSDGNMSASDGGWCSIVGSNDGEGPDTSESSYAPSPDSSSTRPDDV----SEMSIVSCQEQEDDEDPCIDKPIGLMLAMPDPDDAEGDFICSKVRQRYEKAGHTPGKESEVFEVVFKDGSKTEYGREEVLLYKQTYDENEGERGCFEFFFKV 313
            M DGC +DLLD  L +DSG           + D PEAFGTTAED   A PGP  D  VFD ++ SG             AM  +PSSLA  G SGA XXXXXXXXXXXX        A    TASGE +A    +                     XXXXXXXX       S +S GFIDDDTEKDVVHTSDGNM  SDG W SI+GS DGEGPD S SS  PS DS            SEMSIVSCQEQEDDEDPCI+KPIGLMLA PDPDDA+GDFICSKVRQRY KAGHTPGKESEVFEVVFKDGSK EYGREEVLLYK+ YDENEGERGCFEFFFKV
Sbjct:    1 MDDGC-KDLLDLFLDIDSGCDFGLASQSLGNLDTPEAFGTTAED--TAMPGPFSD--VFDFDDMSGS------GHDGGGAMSHQPSSLAVTGGSGAVXXXXXXXXXXXXXXXXXXXKASDEVTASGEADAAHWGQPVAEKPSSLVAAGFGAAGGGAXXXXXXXXXXXXXXXSQASCGFIDDDTEKDVVHTSDGNMGGSDGNWSSIIGSIDGEGPDASASSCIPSSDSXXXXXXXXXXXXSEMSIVSCQEQEDDEDPCIEKPIGLMLATPDPDDADGDFICSKVRQRYVKAGHTPGKESEVFEVVFKDGSKKEYGREEVLLYKRIYDENEGERGCFEFFFKV 330
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8973.17168.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
hypothetical1.560e-8961.00protein n=1 Tax=Ectocarpus siliculosus virus 1 Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8973contigEcto-sp9_F_contig8973:4270..5211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8973.17168.1mRNA_Ecto-sp9_F_contig8973.17168.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8973 4270..5211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8973.17168.1 ID=prot_Ecto-sp9_F_contig8973.17168.1|Name=mRNA_Ecto-sp9_F_contig8973.17168.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=314bp
MSDGCGEDLLDELLLLDSGSFDIPEAFGTTAEDDTAATPGPSFDDGVFDI
NNASGLFDDDDDDGGGGGAMPRKPSSLAAAGSGAAGSGAAGSSGAAAAPG
AATASGEDEARGGGGGQRVAEKPSSLVASGLGAAGGGANGDNQTSSSSSS
SHGFIDDDTEKDVVHTSDGNMSASDGGWCSIVGSNDGEGPDTSESSYAPS
PDSSSTRPDDVSEMSIVSCQEQEDDEDPCIDKPIGLMLAMPDPDDAEGDF
ICSKVRQRYEKAGHTPGKESEVFEVVFKDGSKTEYGREEVLLYKQTYDEN
EGERGCFEFFFKV*
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