prot_Ecto-sp9_F_contig8973.17167.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8973.17167.1
Unique Nameprot_Ecto-sp9_F_contig8973.17167.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length289
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8973.17167.1 vs.
Match: EsV-1-218 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN72_ESV1K)

HSP 1 Score: 322 bits (825), Expect = 1.780e-107
Identity = 224/287 (78.05%), Postives = 233/287 (81.18%), Query Frame = 0 
Query:    1 MTLTCKKHKKCYLRKDSKKCLTPNAWVIFLRTNKNVFKSIGEASMNYRENFKPVLENLIKAGSKDASAKQKKALFHKALCEYFYQQMKASGKNTTSNKKKVSSGVSKVLNKNSIPKTLKIMGAKHSAAALAAKEQAMKKADANVAAKEKIAEDERRKAKDIIRRAVEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAIKRMKITSQAVTAAKDTAAKVAKRKIPRALAALDTSLIVSGVGRKRRKR 287
            MTLTCK HKKCY RKDSKKCLTPNAWV+FLRTNKNVF S GEAS  YR+ FKPVLENLI+AGSKDASAKQKKALFHKA+CEYFY QMKASGKNT  NKKKVSSGVSKVL KNSIPKTLKIMGAKH AAALAAKEQAMKKADA+VAAKEKIAE ERRKAKDIIRRA+EAAAR          XXXXXXXXXXXXXXXXXXXXXXXXXX                              AIK+MKITSQAVT+AKDTA KVAKRKIPRALAALDTSLI+SGVGRKRRKR
Sbjct:    1 MTLTCKTHKKCYTRKDSKKCLTPNAWVVFLRTNKNVFTSRGEASETYRKKFKPVLENLIEAGSKDASAKQKKALFHKAVCEYFYAQMKASGKNTAVNKKKVSSGVSKVLEKNSIPKTLKIMGAKHVAAALAAKEQAMKKADASVAAKEKIAEAERRKAKDIIRRAIEAAARARLLKKEAASXXXXXXXXXXXXXXXXXXXXXXXXXXKKTAFNKAKTKADTLQNSAE---------KAIKKMKITSQAVTSAKDTADKVAKRKIPRALAALDTSLIISGVGRKRRKR 278
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8973.17167.1 vs.
Match: EsV-1-218 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP36_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 7.460e-80
Identity = 163/287 (56.79%), Postives = 177/287 (61.67%), Query Frame = 0 
Query:    1 MTLTCKKHKKCYLRKDSKKCLTPNAWVIFLRTNKNVFKSIGEASMNYRENFKPVLENLIKAGSKDASAKQKKALFHKALCEYFYQQMKASGKNTTSNKKKVSSGVSKVLNKNSIPKTLKIMGAKHSAAALAAKEQAMKKADANVAAKEKIAEDERRKAKDIIRRAVEAAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAIKRMKITSQAVTAAKDTAAKVAKRKIPRALAALDTSLIVSGVGRKRRKR 287
            M LTCKKHK CY+RKD KKCLTPNAWV+FLRTNKNVF SI EAS++Y +NFKPVLENLIK GSKDASAKQKKALFHKA+CEYFY QMKASGKNT SNKKKVSS VSKVL +N IP TLKIMGA H+AAALAAKEQAMK                   A  II+RAVEAAAR                                                                 +AIKRMK T +AVT AKD A KVAKRK+PRALA LDT L  +GVGRKR +R
Sbjct:   16 MALTCKKHKNCYIRKDRKKCLTPNAWVVFLRTNKNVFTSIEEASVDYHKNFKPVLENLIKVGSKDASAKQKKALFHKAICEYFYHQMKASGKNTASNKKKVSSSVSKVLEQNGIPNTLKIMGATHTAAALAAKEQAMKXXXXXXXXXXXXXXXXXXXAAVIIKRAVEAAARARRLKKEADSAKTRKTASNRAKRRADTLNDSAK--------------------------------DAIKRMKKTDKAVTEAKDKANKVAKRKVPRALAGLDTKLKDTGVGRKRTRR 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8973.17167.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
EsV-1-2181.780e-10778.05n=1 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]
EsV-1-2187.460e-8056.79n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 137..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8973contigEcto-sp9_F_contig8973:3375..4241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8973.17167.1mRNA_Ecto-sp9_F_contig8973.17167.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8973 3375..4241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8973.17167.1 ID=prot_Ecto-sp9_F_contig8973.17167.1|Name=mRNA_Ecto-sp9_F_contig8973.17167.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=289bp
MTLTCKKHKKCYLRKDSKKCLTPNAWVIFLRTNKNVFKSIGEASMNYREN
FKPVLENLIKAGSKDASAKQKKALFHKALCEYFYQQMKASGKNTTSNKKK
VSSGVSKVLNKNSIPKTLKIMGAKHSAAALAAKEQAMKKADANVAAKEKI
AEDERRKAKDIIRRAVEAAARARLLEKEAVSAKTRASKATSVTRNSRSSS
TRTTTRAQSAKATASKKKTASNSAKRKADTLNDSANNAIKRMKITSQAVT
AAKDTAAKVAKRKIPRALAALDTSLIVSGVGRKRRKRG*
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