prot_Ecto-sp9_F_contig8964.17155.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8964.17155.1
Unique Nameprot_Ecto-sp9_F_contig8964.17155.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8964.17155.1 vs.
Match: Putative (Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ80_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 4.950e-9
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:    1 PRCSSWNVFFRQLAALLARRSQALLNKSPXXXXXXXXXXXXXXXXXXXXXXAACGSVCGD 60
            PRCSSWNVFFRQ+AALLARRSQALLNK  XXXXXXXXXXXXXXXXXXX   AACGSVCGD
Sbjct:  275 PRCSSWNVFFRQMAALLARRSQALLNKXXXXXXXXXXXXXXXXXXXXXDR-AACGSVCGD 333
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8964.17155.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Putative4.950e-990.00Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus sili... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.509

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8964contigEcto-sp9_F_contig8964:5243..5581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8964.17155.1mRNA_Ecto-sp9_F_contig8964.17155.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8964 5243..5581 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8964.17155.1 ID=prot_Ecto-sp9_F_contig8964.17155.1|Name=mRNA_Ecto-sp9_F_contig8964.17155.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=113bp
PRCSSWNVFFRQLAALLARRSQALLNKSPTTPAAAAGGCSGGGGGGGGGD
RAACGSVCGDASINAGGGGGGGGSAGDASGGPPPPEFAPKLFVVLDNAEA
LLSETVAGIGAS*
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