prot_Ecto-sp9_F_contig8964.17154.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8964.17154.1
Unique Nameprot_Ecto-sp9_F_contig8964.17154.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length325
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8964.17154.1 vs.
Match: Similar (to origin recognition complex, subunit 5-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ81_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 5.080e-98
Identity = 155/165 (93.94%), Postives = 156/165 (94.55%), Query Frame = 0 
Query:  161 MFGLDLNVNLRDGGGGRGGSAEXXXXXXXKRRVRGNDEGRKLFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDDDTRQNQNNNGKDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHNSRDT 325
            MFGLDLNVNLRDGGGGRGGSAE       KRRVRGNDEGR+LFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDDD RQNQNNN KDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHNSRDT
Sbjct:    1 MFGLDLNVNLRDGGGGRGGSAEGGGESGRKRRVRGNDEGRELFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAAALKPLLTETTKRLHGFGRQDDDKRQNQNNNSKDKRGRNGDAKKEGRVKPNGLGLSRSGKHLLVSAYLASHNSRDT 165
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BLAST of mRNA_Ecto-sp9_F_contig8964.17154.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0F2_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 6.120e-73
Identity = 136/148 (91.89%), Postives = 136/148 (91.89%), Query Frame = 0 
Query:    1 VGAGGAGGAGNQWRGQDILTKLASLQGMVDSLTGFAGEEAPLTGGXXXXXXXGQDPHSNASNISAAHRPSQSTPFGRHXXXXXXXXXXQGQPRLPPICPILISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRFPPYTK 148
            VGAGGAGGAGNQWR QDILTKLA LQGMVDSLTGFAGEEA LT  XXXXXX  QD H NASNISAAHRPSQSTPFGRHXXXXXXXX  QGQPRLPPICPILISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRF PYTK
Sbjct:   18 VGAGGAGGAGNQWRDQDILTKLAGLQGMVDSLTGFAGEEATLTAAXXXXXXD-QDLHYNASNISAAHRPSQSTPFGRHXXXXXXXX--QGQPRLPPICPILISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRFQPYTK 162
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BLAST of mRNA_Ecto-sp9_F_contig8964.17154.1 vs.
Match: Putative (Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ80_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.750e-7
Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 VGAGGAGGAGNQWRGQDILTKLASLQGMVDSLTGFA 36
            VGAG   GAGNQWRGQDILTKLASLQGMVDSL GFA
Sbjct:  334 VGAGXXXGAGNQWRGQDILTKLASLQGMVDSLAGFA 369
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8964.17154.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Similar5.080e-9893.94to origin recognition complex, subunit 5-like n=2 ... [more]
Uncharacterized6.120e-7391.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Putative1.750e-788.89Mn/Fe superoxide dismutase n=1 Tax=Ectocarpus sili... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020796Origin recognition complex, subunit 5PFAMPF14630ORC5_Ccoord: 141..323
e-value: 1.4E-13
score: 51.0
IPR020796Origin recognition complex, subunit 5PANTHERPTHR12705ORIGIN RECOGNITION COMPLEX SUBUNIT 5coord: 137..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8964contigEcto-sp9_F_contig8964:476..4717 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8964.17154.1mRNA_Ecto-sp9_F_contig8964.17154.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8964 476..4717 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8964.17154.1 ID=prot_Ecto-sp9_F_contig8964.17154.1|Name=mRNA_Ecto-sp9_F_contig8964.17154.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=325bp
VGAGGAGGAGNQWRGQDILTKLASLQGMVDSLTGFAGEEAPLTGGGGGGG
GSGQDPHSNASNISAAHRPSQSTPFGRHHHHHQQQQQEQGQPRLPPICPI
LISQNGFFASEIMGGRGGGGDWRGAGGRNRSLVMNAYPVQVRFPPYTKEH
LPSVLASTAHMFGLDLNVNLRDGGGGRGGSAEGGRESGRKRRVRGNDEGR
KLFRKMATALVTTLQNETRDAWELGAEAARIWPAYKRSAEDGCYDAHLAA
ALKPLLTETTKRLHGFGRQDDDTRQNQNNNGKDKRGRNGDAKKEGRVKPN
GLGLSRSGKHLLVSAYLASHNSRDT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020796ORC5