prot_Ecto-sp9_F_contig8960.17151.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8960.17151.1
Unique Nameprot_Ecto-sp9_F_contig8960.17151.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length591
Homology
BLAST of mRNA_Ecto-sp9_F_contig8960.17151.1 vs.
Match: BHLH (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G2_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 2.460e-174
Identity = 324/346 (93.64%), Postives = 325/346 (93.93%), Query Frame = 0
Query:  244 MPFPSHQLGALMAASGGDCGDSGTNNGYRDVAALDATGLGLWGWCXXXXXXXXXXXXXXXXXXXXXXXXXARAGGTILAGVPGLGSVGNFQALAATPAATPAAAGQQQYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGLGVDELGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 589
            MPFPSHQLGALMAASGGDCG+SGTNNGYRDVAALDATGLGLWGWC              XXXXXXXXXXX RAGGTILAGVPGLGSVGNFQALAATPAA     G QQYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGLGVDELGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF
Sbjct:    1 MPFPSHQLGALMAASGGDCGNSGTNNGYRDVAALDATGLGLWGWCFPSPTPIMGAGVEGXXXXXXXXXXXXRAGGTILAGVPGLGSVGNFQALAATPAAXXXXXGPQQYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGLGVDELGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 346          
BLAST of mRNA_Ecto-sp9_F_contig8960.17151.1 vs.
Match: BHLH (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG03_9PHAE)

HSP 1 Score: 489 bits (1260), Expect = 1.200e-163
Identity = 288/347 (83.00%), Postives = 293/347 (84.44%), Query Frame = 0
Query:  244 MPFPSHQLGALMAASGGDCGDSGTNNGYRDVAALDATGLGLWGWCXXXXXXXXXXXXXXXXXXXXXXXXXARAGGTILAGVPGLGSVGNFQALAATPAATPAAAGQQQYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGLGVDELGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFR 590
            MPFPSHQLGALMAASGGD G SGTNNGY DVAA+DATGLGLWGWC                       X ARAGGTILAGVPGLGSVGNFQALA +PAAT AAAG QQYPRPMPRGQQFLEPGDVRPPN AGAWGGVS +NNAGGGVSSSEG+VAGLGV ELGAAA                    XXXXXXXXXXX PSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF+
Sbjct:    1 MPFPSHQLGALMAASGGDSGGSGTNNGYPDVAAMDATGLGLWGWCFPSPTPIMGAGVEGRAPISAGAGXGARAGGTILAGVPGLGSVGNFQALATSPAATLAAAGPQQYPRPMPRGQQFLEPGDVRPPNVAGAWGGVSRINNAGGGVSSSEGEVAGLGVGELGAAA-----HSGGTEQQEGSVGSGXXXXXXXXXXXNPSELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFQ 342          
BLAST of mRNA_Ecto-sp9_F_contig8960.17151.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZX8_HETAK)

HSP 1 Score: 115 bits (287), Expect = 1.250e-24
Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 0
Query:  443 SELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEERARWMAET-SDVPEV---GRQDPNGGTIDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 589
            +E KR++RN REQ+RS+  S+QID+LR LLQE G Q K NK +VLS V  Y AQL +Q + L+ ER +W+AE  +  PE     R  P G   D ++VF H  +  A+A V+GR ++ N +FE  +G+   ++ +LTL +L AP +LQ  F
Sbjct:   23 NEKKRKDRNMREQKRSVKISKQIDRLRALLQEAGAQVKPNKHAVLSGVVHYMAQLHKQAQALDLERRQWLAEAHAGAPEAEAKARPGPAGAPCDYRRVFQHMGLPAAVAAVDGRFVDCNAKFEEATGYSRRDVVRLTLFNLAAPHDLQRLF 173          
BLAST of mRNA_Ecto-sp9_F_contig8960.17151.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BWH9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.340e-11
Identity = 56/166 (33.73%), Postives = 85/166 (51.20%), Query Frame = 0
Query:  444 ELKRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQIEQLEEE---------RARWMAETSDVPEVGRQDPNGGTIDCKQVFAHA----------SVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFR 590
            E +R +RN REQ+RS   S+QI +L+ +L    I  K NK S+L   A Y  QLQ +   L+ E         +A  M  T   P+   Q  N  +ID   VF             S A+A+A+++GR ++ N+QFE +SG+  EEL + TL +     +++E F+
Sbjct:  119 EKRRYDRNLREQQRSYKISQQIKELKTVLSNSNIPFKPNKFSILLSTAVYIKQLQSRAMLLDSEHQKLLNSIGQASEMVTTGQSPDDLAQASNTNSIDADLVFVQGLQYSNIFYQCSAAIAVASLDGRFLDCNIQFEKVSGYTKEELTRETLFNFLTNDDMEEVFK 284          
BLAST of mRNA_Ecto-sp9_F_contig8960.17151.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ03_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.570e-10
Identity = 57/176 (32.39%), Postives = 91/176 (51.70%), Query Frame = 0
Query:  446 KRQERNAREQRRSLMTSRQIDKLRKLLQECGIQTKAN-KSSVLSEVASYTAQLQQQI-----------------------------EQLEEERARWMAETSDVPEVG-RQDPNGGT-IDCKQVFAHASVALAMATVEGRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETF 589
            ++Q+RNAREQ+RSL  S+QI  L+ LL+E G + K N K ++L  V  Y  +L++++                             E + +   R  ++ S V     R+D      +    +F   S  LA+A+VEGR I++N++FE  +G+   EL++LT  +L AP ELQ+TF
Sbjct:   28 RKQDRNAREQKRSLKISQQIGHLKSLLEEEGRKVKKNSKMAILLSVEDYIKELEEEVGGMVLGREGGXXXXXXXXXXMDVGVGTSVEAVGQRNGRSESDLSVVTATSVREDREVARGVGYHSLFKQVSTPLAVASVEGRFIDANVRFEMATGYTKAELERLTFFNLVAPEELQDTF 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8960.17151.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
BHLH2.460e-17493.64domain-containing protein n=1 Tax=Ectocarpus silic... [more]
BHLH1.200e-16383.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical1.250e-2444.37protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical2.340e-1133.73protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Uncharacterized1.570e-1032.39protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableCOILSCoilCoilcoord: 487..514
NoneNo IPR availableCOILSCoilCoilcoord: 161..189
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 451..503
e-value: 4.6E-5
score: 32.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 446..498
e-value: 1.4E-4
score: 21.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 445..497
score: 10.842
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 437..520
e-value: 2.2E-10
score: 42.3
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 437..510
IPR017426Nuclear receptor coactivatorPANTHERPTHR10684NUCLEAR RECEPTOR COACTIVATORcoord: 153..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8960contigEcto-sp9_F_contig8960:1731..5522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8960.17151.1mRNA_Ecto-sp9_F_contig8960.17151.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8960 1731..5522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8960.17151.1 ID=prot_Ecto-sp9_F_contig8960.17151.1|Name=mRNA_Ecto-sp9_F_contig8960.17151.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=591bp
CVVLALLLETRHPSLSCLATPAACDVRRQLFFPSPTRRLPAHTHLLFEAP
SSSNKRHHKAPVLQKVKSEPTSSPHISSSSNSNARIRQQQQQQQPLKCDP
CLQPGGGGGGGLPFTPPYPPASTAGGAAALDLPWPLPPPPLSSTLRQPPL
PPLTAQQLQLLQQQQQALHQQQQQVLHQQQQQVLQQQQQQHLLQQQQALQ
QHALRQHQSLQQQQQVLQQPPRTAAAAAAAGSARPAAAGSATGMPFPSHQ
LGALMAASGGDCGDSGTNNGYRDVAALDATGLGLWGWCFPSPTPMMGAGV
EGGAPAPAGAGTGARAGGTILAGVPGLGSVGNFQALAATPAATPAAAGQQ
QYPRPMPRGQQFLEPGDVRPPNAAGAWGGVSGVNNAGGGVSSSEGDVAGL
GVDELGAAAAAAHSGGTEQQEGSVGSGGDRGGNSTSSSSSNPSELKRQER
NAREQRRSLMTSRQIDKLRKLLQECGIQTKANKSSVLSEVASYTAQLQQQ
IEQLEEERARWMAETSDVPEVGRQDPNGGTIDCKQVFAHASVALAMATVE
GRLIESNLQFEALSGHRNEELKQLTLLSLTAPSELQETFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
IPR017426Nuclear_rcpt_coactivator