prot_Ecto-sp9_F_contig8955.17147.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8955.17147.1
Unique Nameprot_Ecto-sp9_F_contig8955.17147.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length266
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8955.17147.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W9_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 1.360e-115
Identity = 223/405 (55.06%), Postives = 233/405 (57.53%), Query Frame = 0 
Query:    3 HQSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEGEDYYYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEDVVANAT-----------------------------------------------------------------------------------VADATA----------------------------------------------------------APVLPLPVETPAPSPAVRGLASPAPTSVGVDGXXXXXXXXXXXXXXXXXXXXXEGEGNNMEGQECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAAXXXXXTASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLDVYKEDTAISEDGVR 266
            ++SQVFAEVVGAS VSVP DEIEICLEAGFIMQLTTATVEGEDY+YNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELE+   +                                                                                     VA  T                                                           APVLPLPVETPAPSPAVRGLAS APTSVGVDG XXXXXXXX            EGEGNNMEGQECMIPE APCTSTA+T +HTNQGVGS+YDPTCAAA     TASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLD+YKEDTAI+EDGVR
Sbjct:  239 YRSQVFAEVVGASAVSVPGDEIEICLEAGFIMQLTTATVEGEDYHYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEEPTPSPVXXXXXXXEPTEPPPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVLPLPVETPAPSPAVRGLASSAPTSVGVDGGXXXXXXXXVAPTSVATSTG-EGEGNNMEGQECMIPEGAPCTSTASTFSHTNQGVGSFYDPTCAAAAA---TASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLDIYKEDTAINEDGVR 639
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BLAST of mRNA_Ecto-sp9_F_contig8955.17147.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE44_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 1.570e-102
Identity = 191/263 (72.62%), Postives = 193/263 (73.38%), Query Frame = 0 
Query:    4 QSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEGEDYYYNFDLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEDVVANATVADATAAPVLPLPVETPAPSPAVRGLASPAPTSVGVDGXXXXXXXXXXXXXXXXXXXXXEGEGNNMEGQECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAAXXXXXTASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVLDVYKEDTAISEDGVR 266
            +SQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVE EDYYYNFDLVVPGRDSSSDLSVSAAP                                                             XXXXXXXXXXXXXXXXXXXXX   GNNMEGQECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAA     TASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCV+DVYKEDTAISEDGVR
Sbjct:   76 RSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEDEDYYYNFDLVVPGRDSSSDLSVSAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNNMEGQECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAAAA---TASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCVVDVYKEDTAISEDGVR 317
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8955.17147.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.360e-11555.06protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.570e-10272.62protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8955contigEcto-sp9_F_contig8955:248..4206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8955.17147.1mRNA_Ecto-sp9_F_contig8955.17147.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8955 248..4206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8955.17147.1 ID=prot_Ecto-sp9_F_contig8955.17147.1|Name=mRNA_Ecto-sp9_F_contig8955.17147.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=266bp
MFHQSQVFAEVVGASTVSVPDDEIEICLEAGFIMQLTTATVEGEDYYYNF
DLVVPGRDSSSDLSVSAAPDEDAQAFICGELEELEDVVANATVADATAAP
VLPLPVETPAPSPAVRGLASPAPTSVGVDGGGGGAVVTTVAPTAVDGGGG
GEGEGNNMEGQECMIPEEAPCTSTAATIAHTNQGVGSYYDPTCAAAAAAA
ATASEEGELPEGCDPSSADSCRFCLFNTPRWQDKNPGEDLPDLVDCPCCV
LDVYKEDTAISEDGVR
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