prot_Ecto-sp9_F_contig8954.17145.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8954.17145.1
Unique Nameprot_Ecto-sp9_F_contig8954.17145.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length125
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8954.17145.1 vs.
Match: HSF_DOMAIN (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.800e-44
Identity = 108/125 (86.40%), Postives = 109/125 (87.20%), Query Frame = 0 
Query:    1 MSEARMNAKVAASPSVVQALTCLASGLPETSDSEENTQESXXXXXXXXXXXXXXXXXXXXXXXXXAGVKREELMPHKVSEERPDGEAAAAGREMPMPNARRGSKAINDVVTKFSIDQALEQLKGE 125
            MSEARMNAKVAASPSVVQALTCLASGLPETSDSEENTQES        XXXXXXXXXXXXXXX   GV RE  MPHKVSEERP GEAAAAGREMP+PN RRGSKAINDVVTKFSIDQALEQLKGE
Sbjct:  583 MSEARMNAKVAASPSVVQALTCLASGLPETSDSEENTQESTAAAVGAAXXXXXXXXXXXXXXXG-TGVNREGFMPHKVSEERPGGEAAAAGREMPLPNPRRGSKAINDVVTKFSIDQALEQLKGE 706
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8954.17145.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
HSF_DOMAIN4.800e-4486.40domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..125
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8954contigEcto-sp9_F_contig8954:2306..2680 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8954.17145.1mRNA_Ecto-sp9_F_contig8954.17145.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8954 2303..2680 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8954.17145.1 ID=prot_Ecto-sp9_F_contig8954.17145.1|Name=mRNA_Ecto-sp9_F_contig8954.17145.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=125bp
MSEARMNAKVAASPSVVQALTCLASGLPETSDSEENTQESTAAAAGAALS
PSSSSTEPQARGGGGAGVKREELMPHKVSEERPDGEAAAAGREMPMPNAR
RGSKAINDVVTKFSIDQALEQLKGE
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