prot_Ecto-sp9_F_contig8954.17144.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8954.17144.1
Unique Nameprot_Ecto-sp9_F_contig8954.17144.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length300
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8954.17144.1 vs.
Match: HSF_DOMAIN (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNL3_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 7.640e-129
Identity = 234/283 (82.69%), Postives = 240/283 (84.81%), Query Frame = 0 
Query:   18 SVDRSSAQQPQPXXXXXXXXXXXXXXXXXXXXXXFGGASPMXXXXXXXXXXXXXXXXXXXVGSMGYLPPLAAAGGQEGGMPMGGPAVEEVGSSARGIGDFRPGQTPMVSSLSRLLENLEHTLEAPLAEEMYTPIGQRNSFCAQMVNIAQVLEEDSSVQQGAEGESRSHRYSYLAQKRRSSVTELAYYLQDMLDEGESNRMITNTPGWTLPPPMPSAPGSLEGAFPSREGSGSGNRVTFKRTAPEDFESYGEYGMGGNVGXXXXXXXXXXSRQAADGMGGPPDA 300
            +VDRSSAQQPQP      XXXXXXXXXXXX    FGGASPM                    GS+GY+PPLAA GG+E GMPMG P VEEVGSSARG+GDFRPGQTPMV SLSRLLENLEHTLEAPLAEEMYTPIGQRNSFCAQMVNIAQVLEED S+QQGAEGESRS R SYLAQKRRSSVTELAYYLQDMLDEGESNRMITNTPGWTLPPPMPSAPGSLEGAFPSREGSGSGNRVTFKRTAPEDFESYGEYGM GNVGXXXXXXXXX SRQAA GMG P DA
Sbjct:  253 NVDRSSAQQPQPHMQQHRXXXXXXXXXXXXMQHRFGGASPMAEQSSPHDDARGGGD----AGSLGYMPPLAAVGGREEGMPMGAPTVEEVGSSARGMGDFRPGQTPMVLSLSRLLENLEHTLEAPLAEEMYTPIGQRNSFCAQMVNIAQVLEEDPSLQQGAEGESRSRRCSYLAQKRRSSVTELAYYLQDMLDEGESNRMITNTPGWTLPPPMPSAPGSLEGAFPSREGSGSGNRVTFKRTAPEDFESYGEYGMAGNVGXXXXXXXXXSSRQAAGGMGAPQDA 531
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8954.17144.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
HSF_DOMAIN7.640e-12982.69domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8954contigEcto-sp9_F_contig8954:75..2161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8954.17144.1mRNA_Ecto-sp9_F_contig8954.17144.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8954 75..2163 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8954.17144.1 ID=prot_Ecto-sp9_F_contig8954.17144.1|Name=mRNA_Ecto-sp9_F_contig8954.17144.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=300bp
GGGGGGGSPFLRASSSGSVDRSSAQQPQPHMQQHRQQQPQHMQQQHQMQH
RFGGASPMSEQSSPHDDARGGGGGGGGVGSMGYLPPLAAAGGQEGGMPMG
GPAVEEVGSSARGIGDFRPGQTPMVSSLSRLLENLEHTLEAPLAEEMYTP
IGQRNSFCAQMVNIAQVLEEDSSVQQGAEGESRSHRYSYLAQKRRSSVTE
LAYYLQDMLDEGESNRMITNTPGWTLPPPMPSAPGSLEGAFPSREGSGSG
NRVTFKRTAPEDFESYGEYGMGGNVGGGGGGGGGGSSRQAADGMGGPPDA
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