prot_Ecto-sp9_F_contig8931.17118.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig8931.17118.1
Unique Name	prot_Ecto-sp9_F_contig8931.17118.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	93

Homology

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BLAST of mRNA_Ecto-sp9_F_contig8931.17118.1 vs.
Match: Cytochrome (P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ4_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 4.230e-36
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 0

Query:   19 MASLPRLIDGFEAGIADADSKMARWAGVQDQGAGAGVLAVLSSLAALWVAWKFLLRCRLSLKLRRMSRTVPSLR 92
            MASLPRLI GF+AGIADADSKMARWAGVQ+Q AGAGVLA LSSLAALW+AWKFLLRCRL+LKLRRMSRTVPSLR
Sbjct:    1 MASLPRLIGGFQAGIADADSKMARWAGVQEQRAGAGVLAALSSLAALWIAWKFLLRCRLALKLRRMSRTVPSLR 74

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BLAST of mRNA_Ecto-sp9_F_contig8931.17118.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ84_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 5.490e-34
Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 0

Query:   19 MASLPRLIDGFEAGIADADSKMARWAGVQDQGAGAGVLAVLSSLAALWVAWKFLLRCRLSLKLRRMSRTVPSLR 92
            MASLPRLID F+AGIADADSKMARWAGVQDQGAG GVLA LSSLAALWVAW+FLLRCRL+LKLRRMSRTVPSLR
Sbjct:    1 MASLPRLIDDFQAGIADADSKMARWAGVQDQGAGVGVLAALSSLAALWVAWRFLLRCRLALKLRRMSRTVPSLR 74

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig8931.17118.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig8931.17118.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Cytochrome	4.230e-36	90.54	P450 n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep...	[more]
Uncharacterized	5.490e-34	91.89	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 50..73
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..92
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 10..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 15..49
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..14
None	No IPR available	TMHMM	TMhelix		coord: 51..73

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig8931	contig	Ecto-sp9_F_contig8931:1921..2199 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig8931.17118.1	mRNA_Ecto-sp9_F_contig8931.17118.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig8931 1921..2199 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig8931.17118.1 ID=prot_Ecto-sp9_F_contig8931.17118.1|Name=mRNA_Ecto-sp9_F_contig8931.17118.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=93bp
AVVSIALLLPHHLAHPTTMASLPRLIDGFEAGIADADSKMARWAGVQDQG
AGAGVLAVLSSLAALWVAWKFLLRCRLSLKLRRMSRTVPSLR*