prot_Ecto-sp9_F_contig8925.17114.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8925.17114.1
Unique Nameprot_Ecto-sp9_F_contig8925.17114.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length206
Homology
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.540e-11
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 0
Query:   22 TGCISA--GDGLCDQANNNAECNWDGGDCCECDCSEPSIGEELCGSNGYDCINPDSSCRSNEGT 83
            T CIS+  GDG CD   N+A+C WDGGDCCECDC + +     CG  GYDC++P SSC  + GT
Sbjct:  408 TACISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYD---CGVVGYDCLDPTSSCSDSPGT 468          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.510e-10
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
Query:   22 TGCISA--GDGLCDQANNNAECNWDGGDCCECDCSEPSIGEE--LCGSNG--YDCINPDSSCRSNEG-TQDSSGRYRRWSRGGDGVFSWCGRV 107
            +GC  A  GDG C   NNNAEC +DGGDCCEC C  P  G+   +C  NG  + C++PD+ C + +G T ++S     W  G DG   WC +V
Sbjct:   29 SGCWDALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWDLG-DG---WCDQV 117          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E3_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 1.160e-9
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 0
Query:   28 GDGLCDQANNNAECNWDGGDCCECDCSEPSIG--EELCGSNG-YDCINPDSSC--RSNEGTQDSSGRYRRWSRGGDGV 100
            G+G CD  NN  EC++DGGDCCEC C +PS+G  ++LC S+  Y CI+P + C    ++ T D    Y+RW + GDG+
Sbjct:   37 GNGECDPRNNKEECDYDGGDCCECTC-DPSLGTSDDLCKSDSFYACIDPLAPCVDEDDDVTADMFHEYQRWHQFGDGL 113          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G136_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.170e-9
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   25 ISAGDGLCDQANNNAECNWDGGDCCECDCSEPSIGEELCGSNGYDCINP 73
            +  GDGLCD  NNN +C WDGGDCCEC C   SI    CG+N YDC++P
Sbjct:  331 LRIGDGLCDDDNNNEDCLWDGGDCCECTCDTTSI--YRCGANDYDCLDP 377          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 3.390e-8
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   29 DGLCDQANNNAECNWDGGDCCECDCSEPSIGEELCGSNGYDCINPDSSC 77
            DG+CD +NNN+ C +DGGDCC CDC + +     CG++G+ C++P SSC
Sbjct:   37 DGMCDSSNNNSGCEYDGGDCCSCDCFDDTY---ECGTDGFTCLDPSSSC 82          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J7_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.990e-7
Identity = 28/53 (52.83%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   28 GDGLCDQANNNAECNWDGGDCCECDCSEPSIGEEL---CGSNGYDCINPDSSC 77
            GDG C Q NNNAEC +DGGDCCEC C   S  +     C  +   CI+PD+SC
Sbjct:   37 GDGFCTQHNNNAECGYDGGDCCECTCQTQSDDDYYSWGCNKDYMACIDPDASC 89          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.100e-7
Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 0
Query:   29 DGLCDQANNNAECNWDGGDCCECDCSEPSIGEELCGSNGYDCINP 73
            DG CD  NNNAECNWDGGDCCEC C +       CG  G+ C++P
Sbjct: 1979 DGWCDLENNNAECNWDGGDCCECTCVDSQY---ECGIQGFSCLDP 2020          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.010e-7
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   22 TGCISA--GDGLCDQANNNAECNWDGGDCCECDCSEPSIGEELCGSNGYDCINPDSSC 77
            +GC ++   DG CD +NN + C++DGGDCC CDC + +     CG  G+ CI+P SSC
Sbjct:   28 SGCFTSYISDGFCDSSNNISGCDYDGGDCCSCDCLDDTY---QCGVVGFTCIDPTSSC 82          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 5.800e-7
Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   28 GDGLCDQANNNAECNWDGGDCCECDCSEP--SIGEELCGSNGYD--CINPDSSC 77
            GDG C   NNNAEC +DGGDCCEC C  P     E  C  +GY   CI+PD+ C
Sbjct:   30 GDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPC 83          
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX54_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 6.030e-7
Identity = 29/61 (47.54%), Postives = 34/61 (55.74%), Query Frame = 0
Query:   28 GDGLCDQANNNAECNWDGGDCCECDC-----------SEPSIGEELCGSNGYDCINPDSSC 77
            GD  C+   NNAEC +DGGDCCECDC           S  S     CG+NGY C++P S C
Sbjct:  145 GDNYCNSYYNNAECGYDGGDCCECDCGTFGTSLDSSSSTSSSANFTCGANGYVCVDPASEC 205          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8925.17114.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
Uncharacterized2.540e-1154.69protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.510e-1044.09protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.160e-946.15protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.170e-959.18protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
LNR3.390e-851.02domain-containing protein n=1 Tax=Ectocarpus silic... [more]
LNR1.990e-752.83domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
LNR2.100e-757.78domain-containing protein n=1 Tax=Ectocarpus silic... [more]
LNR3.010e-746.55domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized5.800e-753.70protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.030e-747.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 17..49
e-value: 1.5E-4
score: 31.1
IPR000800Notch domainPFAMPF00066Notchcoord: 27..48
e-value: 1.8E-4
score: 21.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8925contigEcto-sp9_F_contig8925:1204..4161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8925.17114.1mRNA_Ecto-sp9_F_contig8925.17114.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8925 1156..5242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8925.17114.1 ID=prot_Ecto-sp9_F_contig8925.17114.1|Name=mRNA_Ecto-sp9_F_contig8925.17114.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=206bp
MPAAEPIPEPIPEPTPEPTVPTGCISAGDGLCDQANNNAECNWDGGDCCE
CDCSEPSIGEELCGSNGYDCINPDSSCRSNEGTQDSSGRYRRWSRGGDGV
FSWCGRVGVLARHGSPEVREGPQLLNLSRRSCRSERCPGGGHRIPWVCGL
LLCYRPCSFRSRWCSSCCFRRFSTRSDVDCPRGSRRQSHSSSALRRIKPP
LQGVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom