prot_Ecto-sp9_F_contig8922.17111.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8922.17111.1
Unique Nameprot_Ecto-sp9_F_contig8922.17111.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length260
Homology
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Exo-1,3-beta-glucanase, (family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF5_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 1.260e-162
Identity = 252/259 (97.30%), Postives = 256/259 (98.84%), Query Frame = 0
Query:    1 MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPDDACVHPPATDWAEPLGTDGSSSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHAPEEAQRGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQXXXXXXXXXXXXXXXXXXGGWMPAVFSSGYDTIGQQSLP 259
            MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFID+DFP+DACVHPPATDWAEPLGTDGS SGGDANLVAAQAPSGVTARVDGNAAAAVGVSH+PEEAQRGSQ+GASSPGAMLGLVLLGAMAGALATFLLVRRKAASQ XXXXXXXXXXXXXXXXX GWMPAVFSSGYDTIGQQSLP
Sbjct:  334 MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDLDFPNDACVHPPATDWAEPLGTDGSGSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHSPEEAQRGSQEGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGXXXXXXXXXXXXXXXXXXGWMPAVFSSGYDTIGQQSLP 592          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: GH5 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP7_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 9.750e-150
Identity = 214/246 (86.99%), Postives = 220/246 (89.43%), Query Frame = 0
Query:    1 MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPDDACVHPPATDWAEPLGTDGSSSGGDANLVAAQAPSGVTARVDGNAAAAVGVSHAPEEAQRGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQXXXXXXXXXXXXXXXXXXGGWMPAVF 246
            +YVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHL EREG+SWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFID DFP+DAC+HPPATDWAEPLGTDGS SGGDANL AAQAPSGVTARVDGNAAAAV VS++PEE  RGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQ                   GWMPAVF
Sbjct:  154 IYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLTEREGNSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDTDFPEDACIHPPATDWAEPLGTDGSGSGGDANLAAAQAPSGVTARVDGNAAAAVEVSNSPEEPMRGSQKGASSPGAMLGLVLLGAMAGALATFLLVRRKAASQGASASASGGAEKRGGNRGAGWMPAVF 399          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Glycoside (hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.460e-56
Identity = 83/136 (61.03%), Postives = 106/136 (77.94%), Query Frame = 0
Query:    1 MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPDDACVHPPATDWAEP 136
            MY HERM+C Y SMLRYQTC+ +PV V EWSLA+DNCMP+LD K  D+GQC+H+AER   SWW+ H RSFA RQI  +E+EMGW+FW WKL++   K++P++ +WSF +AV  G+ID  +P DAC+HPPA DWA P
Sbjct:  458 MYTHERMSCGYGSMLRYQTCSTVPVAVLEWSLAIDNCMPYLDPKKQDYGQCNHVAERLTDSWWTSHIRSFASRQIAVFEKEMGWSFWCWKLDEQAMKSDPSAAFWSFKLAVHKGYIDTRYPSDACMHPPAEDWAVP 593          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Cellulase (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.350e-47
Identity = 73/139 (52.52%), Postives = 98/139 (70.50%), Query Frame = 0
Query:    1 MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPDDACVHPPATDWAEPLGT 139
            MYVHERM+C+ TSMLRY+TC+  P + GE+SLA+DNCM  +D KF ++GQCD +A R    WW +H RSFA RQ+D YERE+GW+FWT+KL+ H E    ++  WSF +AV+ G+ID  +P  AC + P  DW +   T
Sbjct:  396 MYVHERMSCAMTSMLRYETCSAAPTITGEFSLAIDNCMDAIDRKFQNYGQCDRIARRSTDPWWKDHIRSFAHRQMDVYERELGWSFWTYKLDKHAETTAESAPLWSFRLAVKEGYIDTSYPPHACRYDPVADWQDKAST 534          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XF99_9EUKA)

HSP 1 Score: 117 bits (292), Expect = 3.430e-26
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 0
Query:    7 MACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPDDA-----CVHP 128
            MAC Y S+LRY+TC+ LP M GEWSLA+D+CM +L       ++F DFGQC +L ER  +  W+   + FA RQ   +E+E+GW FWTWK++    K+  A   WS+SMAVE G+   +   +A     C HP
Sbjct:  442 MACGYGSLLRYKTCSSLPTMTGEWSLAIDDCMKFLTGSTSSANQFTDFGQCKNLKERN-TPQWTALIKDFAARQRAVFEKELGWVFWTWKVDKEASKDISAP-LWSYSMAVEAGYFPDNLNTEADVTKGCDHP 572          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A6T6YDK2_9EUKA)

HSP 1 Score: 117 bits (292), Expect = 4.500e-26
Identity = 58/135 (42.96%), Postives = 81/135 (60.00%), Query Frame = 0
Query:    5 ERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLD------SKFADFGQCDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPDD-----ACVHP 128
              MAC Y S+LRY+TC+ LP + GEWSLA+D+CM +L       ++F DFGQC  L  R  +  W+   + F+ RQ   +E+E+GW FW WK++D   K+  A KYWS++ AVEH +   D   +     AC HP
Sbjct:  512 SNMACGYGSLLRYKTCSSLPTLTGEWSLAIDDCMKFLTGSTHSANQFKDFGQCKDLESRT-TDQWTTLVKDFSRRQRAVFEKELGWIFWAWKVDDVANKDISA-KYWSYTKAVEHEYFPKDLEKEPKVVLACDHP 644          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Cellulase (domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168R515_ABSGL)

HSP 1 Score: 65.9 bits (159), Expect = 1.250e-8
Identity = 45/137 (32.85%), Postives = 66/137 (48.18%), Query Frame = 0
Query:   10 SYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWL----------------DSKFADFGQCDHLAEREGSSWWSEHT---RSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFI--DVDFPDDAC 125
            ++ S L   T  V P MVGE+S A ++C  +L                DSK  D   C+     + +SW SE+     +F   Q+D YE  +GW FWT+K E H+      + +W +S+A E GF   DV+  D +C
Sbjct:  416 TWRSQLSESTRDVAPTMVGEFSYATNDCGKYLNGVGYGNRYENTMDGGDSKCTD---CNCTEINDWTSWTSEYKSFLNTFIQHQMDAYEAGVGWFFWTYKTEQHI------NPHWDYSLAWEQGFAPKDVNKRDFSC 543          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Cellulase (domain-containing protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BWU5_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 9.840e-8
Identity = 37/128 (28.91%), Postives = 62/128 (48.44%), Query Frame = 0
Query:   15 LRYQTCAVLPVMVGEWSLAVDNCMPWL---------DSKFADFGQ--------CDHLAEREGSSWWSEHT---RSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVDFPD 122
            L+    +V P MVGE+SLA ++C  ++         +  F + G         C+  A  +  +W  ++    R F  RQ+D +E  +GW FWT+K E+H+      + +W +S+  E G+I  D  D
Sbjct:  400 LKNAMASVAPTMVGEFSLATNDCGKYVNGVGLGTRYEGTFMENGHPVPAVCPNCNCTASNDWKNWTEDYKVFLRQFIERQMDAFENSLGWFFWTYKTENHI------NPHWDYSLGWEQGWIPRDAND 521          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Exo-beta-1,3-glucanase (n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZTV6_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 1.170e-7
Identity = 40/132 (30.30%), Postives = 62/132 (46.97%), Query Frame = 0
Query:    4 HERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDS--KFADFG-----------QCDHLAEREGSSW---WSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFIDVD 119
            H  +AC++   +     A LP MVGEWSLA ++C  WL+   + A F             C  + + + +++   + +  R FA  Q+D YE   GW FW +K E         S  W + + VE G+I +D
Sbjct:  292 HIDLACTHKREVATSQ-ANLPTMVGEWSLATNDCTKWLNGYGRGARFNGTYITTAPVCPSCSCIGDADYANFSTHYKQWLRRFAETQMDAYEAGSGWIFWNFKAEQ--------SPQWDYMLGVEQGWIPID 414          
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Match: Glycoside (hydrolase superfamily (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4V1J0X0_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 2.110e-6
Identity = 38/131 (29.01%), Postives = 51/131 (38.93%), Query Frame = 0
Query:    4 HERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQCDHLAEREG------------------SSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEPASKYWSFSMAVEHGFI 116
            H    C+    L   T    PV+VGEWSLA D+C  WL+           +  R G                  +  + +  R FA  Q+D YE   GW FW +K E         S  W + + VE G+I
Sbjct:   87 HAATVCAKRKELEAATAQQYPVIVGEWSLATDDCAKWLNGFNVGARWDGTIPARNGKPIHPNATCEGRNDVATFTPEYRDWLRRFAELQMDAYEAGRGWFFWNFKTEQ--------SPQWDYLLGVEEGWI 209          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8922.17111.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Exo-1,3-beta-glucanase,1.260e-16297.30family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
GH59.750e-15086.99protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Glycoside7.460e-5661.03hydrolase superfamily n=1 Tax=Tribonema minus TaxI... [more]
Cellulase2.350e-4752.52domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical3.430e-2645.11protein n=1 Tax=Lotharella oceanica TaxID=641309 R... [more]
Hypothetical4.500e-2642.96protein n=1 Tax=Amorphochlora amoebiformis TaxID=1... [more]
Cellulase1.250e-832.85domain-containing protein n=1 Tax=Absidia glauca T... [more]
Cellulase9.840e-828.91domain-containing protein n=1 Tax=Apophysomyces os... [more]
Exo-beta-1,3-glucanase1.170e-730.30n=1 Tax=Dimargaris cristalligena TaxID=215637 RepI... [more]
Glycoside2.110e-629.01hydrolase superfamily (Fragment) n=1 Tax=Syncephal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80coord: 1..127
e-value: 2.4E-18
score: 68.5
NoneNo IPR availablePANTHERPTHR31297FAMILY NOT NAMEDcoord: 21..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..213
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 214..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..191
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 18..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8922contigEcto-sp9_F_contig8922:243..3389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8922.17111.1mRNA_Ecto-sp9_F_contig8922.17111.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8922 234..3389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8922.17111.1 ID=prot_Ecto-sp9_F_contig8922.17111.1|Name=mRNA_Ecto-sp9_F_contig8922.17111.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=260bp
MYVHERMACSYTSMLRYQTCAVLPVMVGEWSLAVDNCMPWLDSKFADFGQ
CDHLAEREGSSWWSEHTRSFAMRQIDRYEREMGWAFWTWKLEDHLEKNEP
ASKYWSFSMAVEHGFIDVDFPDDACVHPPATDWAEPLGTDGSSSGGDANL
VAAQAPSGVTARVDGNAAAAVGVSHAPEEAQRGSQKGASSPGAMLGLVLL
GAMAGALATFLLVRRKAASQGASASASGGAEKGGGNRGGGWMPAVFSSGY
DTIGQQSLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF