prot_Ecto-sp9_F_contig8920.17110.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8920.17110.1
Unique Nameprot_Ecto-sp9_F_contig8920.17110.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: RAC, (RHO family GTPase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LIW3_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 6.250e-81
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVIS 123
            + DVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVIS
Sbjct:   74 QTDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVIS 196          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Rho (family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z467_9STRA)

HSP 1 Score: 159 bits (403), Expect = 2.370e-47
Identity = 78/100 (78.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAI 100
            + DVFLVCFSVVD TSF NVKLKWIPELQ HA G+PFILVGTK+DLR+D  A + LAERRQ PISF+EAQ LA+EL AYRY+ECSALTQ GLK VFDGAI
Sbjct:   74 QTDVFLVCFSVVDTTSFQNVKLKWIPELQHHAAGVPFILVGTKMDLRNDSKALRSLAERRQQPISFNEAQNLANELGAYRYMECSALTQQGLKHVFDGAI 173          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Ras-like (protein Rac1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ94_SAPPC)

HSP 1 Score: 154 bits (390), Expect = 2.290e-45
Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVI 122
            + DVFL+CFSVV P SF NVK KW PE+Q HAPG+PFILVGTKLDLR+D+D  +RL E+R  P++    +AL +EL A++YLECSALTQ GLKQVFD +IRCVL+ +Q+  KKK+   +C I
Sbjct:   76 QTDVFLICFSVVSPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLREDEDTVERLKEKRSAPVTHEMGEALKNELGAFKYLECSALTQKGLKQVFDESIRCVLQ-HQKNPKKKRS--HCTI 194          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Rac1 (n=1 Tax=Eurychasma dicksonii TaxID=159317 RepID=A0A1B3SNZ7_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.150e-45
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVL 104
            + DVFL+CFSVV P SF NVK KW PE+Q HAPG+PFILVGTKLDLRDD++  +RL E+R +PI+  + +AL SEL AY+YLECSALTQ GLKQVFD AIRCV+
Sbjct:   74 QTDVFLICFSVVRPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLRDDEETIERLREKRLSPITPEQGEALRSELGAYKYLECSALTQKGLKQVFDEAIRCVI 177          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L3_AURAN)

HSP 1 Score: 152 bits (385), Expect = 1.240e-44
Identity = 72/122 (59.02%), Postives = 95/122 (77.87%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVI 122
            + DVFL+CFS+ +P SF N++ KW PE+  HAPG+PFILVGTKLDLR+D D   RL ++R+ P++  E +ALA+EL+AY+Y+ECSALTQ GLK VFD AIRCV++  Q+K KKK   K CV+
Sbjct:   74 QTDVFLLCFSITNPNSFENIRTKWYPEINHHAPGVPFILVGTKLDLRNDPDTIARLQQKRRAPVNTEEGEALANELNAYKYIECSALTQQGLKGVFDDAIRCVID-TQKKPKKKS--KRCVL 192          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Aste57867_18068 (protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAI3_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.390e-44
Identity = 75/118 (63.56%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLE--RNQRKMKKKKG 116
            + DVFL+CFSVV P SF NVK KW PE+Q HAPGIPFILVGTKLDLRDD++  +RL E+R  PI+  + +AL +EL AY+YLECSAL Q GLKQVFD  IRCVL+  +N +K  +K G
Sbjct:   74 QTDVFLICFSVVSPASFENVKAKWFPEIQHHAPGIPFILVGTKLDLRDDEETIERLKEKRLKPITTEQGEALKNELGAYKYLECSALNQKGLKQVFDEGIRCVLQHQKNPKKSTRKFG 191          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6J5_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.420e-43
Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVIS 123
            + DVFL+CFS+ +PTSF NV+ KW PE+ SHAPG+PFILVGTKLDLR+D +   RL ++R+ P++  +   LA EL AY+Y+ECSALTQ GLK VFD +IRCVL+  +   K KK KK CV++
Sbjct:   74 QTDVFLLCFSITNPTSFENVRTKWYPEIASHAPGVPFILVGTKLDLRNDPETVARLQQKRRMPVNSEDGMQLARELGAYKYIECSALTQQGLKGVFDDSIRCVLDAMK---KPKKKKKKCVVA 193          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBT2_GLOUD)

HSP 1 Score: 149 bits (375), Expect = 4.300e-43
Identity = 69/117 (58.97%), Postives = 90/117 (76.92%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGK 117
            + DVFL+CFS+V   SF NVK KW+PE++ HAPG+PFILVGTKLDLRDD D  ++L E++ TPI+  + ++L +EL A++YLECSALTQ GLKQVFD  IRCVL   Q    +++GK
Sbjct:   74 QTDVFLICFSLVSRASFENVKSKWLPEIRHHAPGVPFILVGTKLDLRDDHDTLEKLREKKMTPITTEQGESLKNELGAFKYLECSALTQKGLKQVFDEGIRCVLTNQQNPKGRQRGK 190          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: RAC1 (protein (Fragment) n=8 Tax=Opisthokonta TaxID=33154 RepID=A0A851USK2_9PASS)

HSP 1 Score: 148 bits (373), Expect = 8.890e-43
Identity = 71/122 (58.20%), Postives = 90/122 (73.77%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVI 122
            + DVFL+CFSVV P SF N++ KW PE+Q H+PG P ILVGTKLDLRDD +  ++L ERRQ PI +S+  A+A+++ A +YLECSALTQ GLK VFD AIR VL  N+R  K KK    C++
Sbjct:   74 QTDVFLLCFSVVSPPSFENIRTKWWPEIQHHSPGTPIILVGTKLDLRDDPNQIEKLRERRQAPIGYSQGSAMANDIKAAKYLECSALTQKGLKTVFDEAIRTVLNPNRRAGKAKKSGSGCIL 195          
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Match: Rho-like (family small GTPase n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XL52_9TREE)

HSP 1 Score: 147 bits (371), Expect = 2.010e-42
Identity = 73/122 (59.84%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    1 EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVI 122
            + DVFL+CFSVV P SF N++ KW PE+Q H+PG P ILVGTKLDLRDD  A +RL ERR  PI +++  A+A+++ A RYLECSALTQ GLK VFD AIR VL  N+R   ++KG  NCV+
Sbjct:   79 QTDVFLLCFSVVSPASFENIRTKWFPEIQHHSPGTPIILVGTKLDLRDDPAALERLRERRSQPIQYTQGAAMANDIRAARYLECSALTQVGLKTVFDQAIRTVLNPNRRSNGRRKGN-NCVL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8920.17110.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RAC,6.250e-8198.37RHO family GTPase n=3 Tax=Phaeophyceae TaxID=2870 ... [more]
Rho2.370e-4778.00family GTPase n=1 Tax=Tribonema minus TaxID=303371... [more]
Ras-like2.290e-4561.48protein Rac1 n=4 Tax=Saprolegniaceae TaxID=4764 Re... [more]
Rac16.150e-4569.23n=1 Tax=Eurychasma dicksonii TaxID=159317 RepID=A0... [more]
Uncharacterized1.240e-4459.02protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Aste57867_180681.390e-4463.56protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A... [more]
Hypothetical1.420e-4357.72protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized4.300e-4358.97protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
RAC18.890e-4358.20protein (Fragment) n=8 Tax=Opisthokonta TaxID=3315... [more]
Rho-like2.010e-4259.84family small GTPase n=1 Tax=Cutaneotrichosporon ol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 33..46
score: 48.47
coord: 81..103
score: 30.83
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 1..106
e-value: 6.1E-23
score: 92.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 3..106
e-value: 0.0016
score: -65.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..109
e-value: 2.0E-38
score: 133.6
NoneNo IPR availablePANTHERPTHR24072RHO FAMILY GTPASEcoord: 2..115
NoneNo IPR availablePANTHERPTHR24072:SF105RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1coord: 2..115
NoneNo IPR availablePROSITEPS51419RABcoord: 1..123
score: 11.614
IPR001806Small GTPasePFAMPF00071Rascoord: 3..103
e-value: 6.5E-21
score: 74.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8920contigEcto-sp9_F_contig8920:3210..4244 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8920.17110.1mRNA_Ecto-sp9_F_contig8920.17110.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8920 3210..4244 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8920.17110.1 ID=prot_Ecto-sp9_F_contig8920.17110.1|Name=mRNA_Ecto-sp9_F_contig8920.17110.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
EKDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQ
DACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAI
RCVLERNQRKMKKKKGKKNCVIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase