prot_Ecto-sp9_F_contig8918.17105.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8918.17105.1
Unique Nameprot_Ecto-sp9_F_contig8918.17105.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: CBF (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 6.840e-36
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    8 GGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD 72
            GGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD
Sbjct:  827 GGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD 891          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: CBF (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK74_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 5.110e-35
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0
Query:    8 GGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD 72
            GG VQPLWEASLLRSHVHPSVSRFA SLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD
Sbjct:   59 GGEVQPLWEASLLRSHVHPSVSRFAGSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD 123          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM83_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.600e-14
Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 0
Query:    1 QRKKLHPGGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD 72
            +R+ LH G    P WE   L  H HPSV +FA+S++    +  V Y GDPL D +LM FL+R  YKNPKA+D
Sbjct:  317 KREPLHSGAASSPAWELIALAQHYHPSVRKFAESVLEAPVS-GVGYSGDPLKDFSLMSFLDRFVYKNPKAKD 387          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: CBF (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CW61_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.530e-13
Identity = 32/58 (55.17%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   14 LWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKAR 71
            LWE  LL  H HPSV RFA S++  +  H V Y GDPL D + M FL+R A+KNPK R
Sbjct:  623 LWEVGLLALHFHPSVQRFAASVLDPRARHRVTYSGDPLQDFSTMAFLDRFAFKNPKLR 680          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC94_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.590e-13
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    9 GGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPK 69
            GGV  LWEA+ LR H HPSV+ FA  L++    H ++YKGDPL D  LMPFL+R+AY+N K
Sbjct:  865 GGVA-LWEATQLRWHYHPSVAHFALELLTPP-GHGIRYKGDPLVDFGLMPFLDRLAYRNAK 923          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4K5P2_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 5.110e-11
Identity = 28/71 (39.44%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 QRKKLHPGGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKAR 71
            +R+  +      P WE SLL SH HPSV ++A+ L +    + ++YKGDP+ D++L+ FL+R +++NPK +
Sbjct:    2 KREPKYANASSTPTWELSLLVSHYHPSVRKWAELLST---GNPIEYKGDPILDMSLIAFLDRYSFRNPKRK 69          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: CBF (domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SZN1_SELML)

HSP 1 Score: 63.5 bits (153), Expect = 4.590e-10
Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 0
Query:    2 RKKLHPGGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKAR 71
            R  LH        WE ++L SH+HPSVS  A +++S   N AV Y GDP+ DLA   FL+R A + PKAR
Sbjct:  651 RDPLHCKADQTCWWELAILASHIHPSVSTMAKTILS---NAAVVYSGDPIQDLAFTAFLDRFAERKPKAR 717          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: CBF (domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FXN2_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 4.600e-10
Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    1 QRKKLHPGGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARD 72
            +R+ L+ GG    LWE +LL  H HPSV++FA +++  ++   ++Y  DPL D  L+ FL++  YKN K ++
Sbjct:  682 KREPLYAGGDTTCLWELTLLARHYHPSVAKFAATILMGRK---IEYSSDPLVDFTLIHFLDKFVYKNAKKKE 750          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: CBF (domain-containing protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LPV8_STIJA)

HSP 1 Score: 61.2 bits (147), Expect = 3.000e-9
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   15 WEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKAR 71
            WE   L  H HPSVS+FA+ +++ +    + Y G+PL D  +M FLNR  YKNPK+R
Sbjct:  627 WELMKLAGHFHPSVSQFAEKILTGE---TIMYDGNPLDDFTIMKFLNRFVYKNPKSR 680          
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Match: Putative (CCAAT/enhancer-binding protein zeta n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JG28_STIJA)

HSP 1 Score: 60.8 bits (146), Expect = 3.830e-9
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:   15 WEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKAR 71
            WE   L  H HPSVS+FA+ +++ +    + Y G+PL D  +M FLNR  YKNPK+R
Sbjct:   27 WELMKLAGHFHPSVSQFAEKILTGK---TIMYDGNPLDDFTIMKFLNRFVYKNPKSR 80          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8918.17105.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
CBF6.840e-36100.00domain-containing protein n=1 Tax=Ectocarpus silic... [more]
CBF5.110e-3596.92domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical3.600e-1448.61protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014... [more]
CBF6.530e-1355.17domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Uncharacterized6.590e-1357.38protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical5.110e-1139.44protein (Fragment) n=1 Tax=Paramoeba aestuarina Ta... [more]
CBF4.590e-1047.14domain-containing protein n=4 Tax=Selaginella moel... [more]
CBF4.600e-1038.89domain-containing protein n=1 Tax=Sphaeroforma arc... [more]
CBF3.000e-947.37domain-containing protein n=1 Tax=Stichopus japoni... [more]
Putative3.830e-947.37CCAAT/enhancer-binding protein zeta n=1 Tax=Sticho... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005612CCAAT-binding factorPFAMPF03914CBFcoord: 12..32
e-value: 6.6E-5
score: 23.0
IPR040155CEBPZ/Mak21-likePANTHERPTHR12048CCAAT-BINDING FACTOR-RELATEDcoord: 12..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8918contigEcto-sp9_F_contig8918:736..951 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8918.17105.1mRNA_Ecto-sp9_F_contig8918.17105.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8918 736..951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8918.17105.1 ID=prot_Ecto-sp9_F_contig8918.17105.1|Name=mRNA_Ecto-sp9_F_contig8918.17105.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=72bp
QRKKLHPGGGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDP
LADLALMPFLNRMAYKNPKARD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005612CCAAT-binding_factor
IPR040155CEBPZ/Mak21-like