prot_Ecto-sp9_F_contig8910.17099.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8910.17099.1
Unique Nameprot_Ecto-sp9_F_contig8910.17099.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8910.17099.1 vs.
Match: Beta (1,3 exoglucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK84_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 9.980e-41
Identity = 70/81 (86.42%), Postives = 71/81 (87.65%), Query Frame = 0 
Query:    1 AVSRGDLFTCLSEADSGGLLRGRGNGLCVPPCTGDGPQTCGGDAAFDVYKIVPRGDDENADGIALGNSPTTTDTATTSTTT 81
            AVSRGDLFTCLSEADS G L GRGNG+C  PCTGD  QTCGG AAFD YKIVPRGDDENADGIALGNSPTTTDTATTS TT
Sbjct:  125 AVSRGDLFTCLSEADSAGFLGGRGNGVCNSPCTGDASQTCGGHAAFDAYKIVPRGDDENADGIALGNSPTTTDTATTSPTT 205
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BLAST of mRNA_Ecto-sp9_F_contig8910.17099.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z3_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 6.950e-39
Identity = 67/80 (83.75%), Postives = 70/80 (87.50%), Query Frame = 0 
Query:    1 AVSRGDLFTCLSEADSGGLLRGRGNGLCVPPCTGDGPQTCGGDAAFDVYKIVPRGDDENADGIALGNSPTTTDTATTSTT 80
            AVSRGDLFTCLSE DSGG LRGRGNG+C  PCTGD  QTCGG AAFD YKIV RGDDENADGIALG+SP+TTDTA TSTT
Sbjct:  133 AVSRGDLFTCLSEGDSGGFLRGRGNGVCNSPCTGDASQTCGGHAAFDAYKIVSRGDDENADGIALGDSPSTTDTAATSTT 212
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8910.17099.1 vs.
Match: WSC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL41_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 9.840e-10
Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0 
Query:    1 AVSRGDLFTCLSEADSGGLLRGRGNGLCVPPCTGDGPQTCGGDAAFDVYKI-VPRGDDEN 59
            AV+RGDL TC +EAD+G +   R  G+C  PCTGD  Q CGG  +FDVY++ +  G D N
Sbjct:  139 AVTRGDLCTCFTEADTG-IFDDRKGGVCDAPCTGDSSQPCGGVDSFDVYQLSLTEGHDRN 197
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8910.17099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK89_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 9.020e-9
Identity = 27/35 (77.14%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:    1 AVSRGDLFTCLSEADSGGLLRGRGNGLCVPPCTGD 35
            AVSR DLFT LSEADS G L GRGNG+C  PCTGD
Sbjct:   62 AVSRCDLFTSLSEADSAGFLGGRGNGVCNSPCTGD 96
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8910.17099.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Beta9.980e-4186.421,3 exoglucanase n=1 Tax=Ectocarpus siliculosus Ta... [more]
WSC6.950e-3983.75domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
WSC9.840e-1051.67domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized9.020e-977.14protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8910contigEcto-sp9_F_contig8910:734..2150 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8910.17099.1mRNA_Ecto-sp9_F_contig8910.17099.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8910 734..2150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8910.17099.1 ID=prot_Ecto-sp9_F_contig8910.17099.1|Name=mRNA_Ecto-sp9_F_contig8910.17099.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=91bp
AVSRGDLFTCLSEADSGGLLRGRGNGLCVPPCTGDGPQTCGGDAAFDVYK
IVPRGDDENADGIALGNSPTTTDTATTSTTTEGKEALNDAP
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