prot_Ecto-sp9_F_contig891.17098.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig891.17098.1
Unique Nameprot_Ecto-sp9_F_contig891.17098.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length607
Homology
BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6T8_ECTSI)

HSP 1 Score: 879 bits (2270), Expect = 0.000e+0
Identity = 453/459 (98.69%), Postives = 456/459 (99.35%), Query Frame = 0
Query:  148 MLALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDFERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVAAAEPSL 606
            MLALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDT+SVQVTAPGSAPL+VESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEED ERRLWRAIEG AARA+GRGGK PGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVAAAEPSL
Sbjct:    1 MLALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTSSVQVTAPGSAPLVVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDIERRLWRAIEGAAARADGRGGKKPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVAAAEPSL 459          
BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6C6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.990e-9
Identity = 71/265 (26.79%), Postives = 119/265 (44.91%), Query Frame = 0
Query:  224 FVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAK-----FVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNAR--DPLALHASVNRFATRESRAARGGVKAFLVSL 481
            FV RP L     L   +Q   + T+L++G+RGSGKT  +R AL     V+ +++  K         ++ +I+  S QV   G+   +V   + ++      P     PI+VV +D RC    L  VL+ CK +  + +  +     F+V+   +R A     ++  LRV G+++      EA   A   +P +        R+ ++A  +V K    +  L RV  A RN    D   + A++ R   +E + A  G  +F  SL
Sbjct:   52 FVKRPTL--QGILSTALQETGSKTVLLYGQRGSGKTSFIRYALKGRRGVLSIQITKKTHDEA----SKELIEKMSSQVDLLGTQQDLV--FMEDVFAACRVP-----PIIVVTMDARCKGEVLEAVLILCKSFSYENSFRRGKQPRFLVDISFSRAAIDASSNIEVLRVVGIQVGNFPRDEALLYATERMPASLKDR---RRRHEIAMSVVEKFDCNVYTLQRVCKALRNGHPTDVSTVAATIERELRKEQQWAARGWYSFCCSL 300          
BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHU7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.420e-8
Identity = 86/340 (25.29%), Postives = 129/340 (37.94%), Query Frame = 0
Query:  245 NPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLI-VESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAF--LVSLRTELERKGGGSVHGPGEEDFERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKA 581
            NP+LLV+G RG GKT  V  AL     V+ +   G         L Q +          PG  P   +   LR I     K      P+VV+ +D+R +   L  +LLA ++ G  E LA F+    + R A GLPI LS  +V G +       EA       +P              +A++ V ++G   +DLV +  A R         A V          AR  ++ F  +       E K G +        F  +L  A  G AA A      +  L +    +          +  +       VDPF + +S++S   R A++  + A A
Sbjct:  105 NPSLLVYGARGGGKTSIVEAALQGIAGVLAMSYNGDGTD-----LEQRLEQLLLKPAGLPGHGPKADLGDRLRAILTFYQKVYDRR-PVVVIHIDERTAPATLSKLLLAAEQLGFQEKLATFIFVVSAYRSALGLPIGLSQTQVLGYRAPDFTEDEALAYLAKHLPSCPG----------MAEFAVQQIGTRAMDLVELCSACRGVESETECRARVAALRAMRIGDARFALRGFVGIAKKNKAFEEKAGLA--------FFEKLLAAHGGDAALARACVLDDDVLTDYHAAVAFGFEKPALLLSALAEYHAFVVDPFYHTISMQSHCMRIAIQEYLQAVA 420          
BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.840e-7
Identity = 80/332 (24.10%), Postives = 134/332 (40.36%), Query Frame = 0
Query:  243 RYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDFERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALE 574
            + NP+LLV+G RG GKT  V  AL  +  V+ +   G         L Q ++    +    P +    +   LR I    ++      P+VV+++++R     L  +LLA K+ G  E LA F+    ++R A GL I +   RV G +    +  EA       +P              +A+++V ++G   +DLV +    R           V  +     + AR  ++ F+   +         SV       F R+L  A    AA A   G      D   +  G  E   E  +  +      ++DPF + +S++S F + A+E
Sbjct:   44 KQNPSLLVYGARGVGKTSLVEAALQGTAGVLGMSYNGDGTDLEQ-RLEQLLLKLAGLPEHGPKAD---LGDRLRAIL-TFYQIVHKRRPVVVIDINERTGPATLSKLLLAAKQLGFQEKLATFIFVVSASRSALGLTIGIRQSRVRGYRAPDFSEDEALAYLAKHLPPFPG----------MAEFVVQQIGTRAMDLVELCSECRGVELEPECRERVEAYREACIKDARFALRGFVAIAKKNEAFSKEASVA------FFRQLLAADSDDAALA---GTCVLDDDYAADAFGFEEP--ELLLLALAKYHAFAIDPFDHTISMQSHFMQTAIE 349          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized0.000e+098.69protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6T8... [more]
Uncharacterized2.990e-926.79protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
Uncharacterized2.420e-825.29protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.840e-724.10protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..606
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.827

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig891contigEcto-sp9_F_contig891:5386..11725 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig891.17098.1mRNA_Ecto-sp9_F_contig891.17098.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig891 5308..12980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig891.17098.1 ID=prot_Ecto-sp9_F_contig891.17098.1|Name=mRNA_Ecto-sp9_F_contig891.17098.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=607bp
MALKLQLLLLVGIFCNADGFQTSCCAAGSRGSAFSPTQGRGRSRCLTPPP
AIPSASAKPRPRSVARVNARMSHNTLRTGGYLRSFRGLIAHFRQIHRSRS
VPAAAAAAAGRRRAGSLPPLPSARHCGTAARAQARTELDQLPKHQGAMLA
LPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQS
RKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLV
HGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQ
VTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVL
LACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEA
QQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNAR
DPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEED
FERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPA
SPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVA
AAEPSL*
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