prot_Ecto-sp9_F_contig889.17064.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig889.17064.1
Unique Nameprot_Ecto-sp9_F_contig889.17064.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length153
Homology
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BLAST of mRNA_Ecto-sp9_F_contig889.17064.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L4_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 3.770e-76
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 
Query:    1 VAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDEERADDADPSSDSEEGESSG 114
            VAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDEERADDADPSSDSEEGESSG
Sbjct:   56 VAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDEERADDADPSSDSEEGESSG 169
[Close]
BLAST of mRNA_Ecto-sp9_F_contig889.17064.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF52_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 6.650e-53
Identity = 83/104 (79.81%), Postives = 87/104 (83.65%), Query Frame = 0 
Query:    1 VAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDEERADDADPS 104
            +AAF  K+DNFVELV DCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHS CVFSKICH +N QG CDMC SPM FEKT RKGT A IRFHRDE   + AD S
Sbjct:   17 IAAFAEKHDNFVELVEDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSRCVFSKICHASNGQGKCDMCKSPMEFEKTTRKGTHAMIRFHRDETDKNAADSS 120
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BLAST of mRNA_Ecto-sp9_F_contig889.17064.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L3_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 1.210e-51
Identity = 79/95 (83.16%), Postives = 83/95 (87.37%), Query Frame = 0 
Query:    1 VAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDE 95
            +AAF  K+DNFVELV DCYICLEPLLNNIGTTKFGVVSW+CRCTVPQKAHS CVFSKICH  N QG CDMC+SPM FEKT RKGT A IRFHRDE
Sbjct:   61 IAAFAEKHDNFVELVEDCYICLEPLLNNIGTTKFGVVSWKCRCTVPQKAHSRCVFSKICHATNGQGKCDMCNSPMEFEKTTRKGTHAMIRFHRDE 155
[Close]
BLAST of mRNA_Ecto-sp9_F_contig889.17064.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D2_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.940e-10
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:   62 ANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDEER--ADDADPSSDSEEGESS 113
            A  +G CD+C SPM+FEKT RKG QAT++FHRDE+R  ADD+   SD E GE S
Sbjct:   19 ATGKGACDICGSPMVFEKTMRKGKQATLQFHRDEKRTDADDSSRGSDMESGEDS 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig889.17064.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized3.770e-76100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L4... [more]
Uncharacterized6.650e-5379.81protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.210e-5183.16protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.940e-1061.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig889contigEcto-sp9_F_contig889:3069..4276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig889.17064.1mRNA_Ecto-sp9_F_contig889.17064.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig889 3069..5535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig889.17064.1 ID=prot_Ecto-sp9_F_contig889.17064.1|Name=mRNA_Ecto-sp9_F_contig889.17064.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=153bp
VAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAH
SACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRFHRDEERADD
ADPSSDSEEGESSGSESLSDVSNEDSNSSLSGSGLSNSESSSGSDSDDGD
DD*
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