prot_Ecto-sp9_F_contig8886.17062.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8886.17062.1
Unique Nameprot_Ecto-sp9_F_contig8886.17062.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length397
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8886.17062.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS39_9PHAE)

HSP 1 Score: 544 bits (1402), Expect = 4.760e-183
Identity = 341/391 (87.21%), Postives = 345/391 (88.24%), Query Frame = 0 
Query:    1 MPDMDTPQISGILEEHAPXXXXXXXXXVVGVQQASKRPRDDGSPVRGKRGRGENGEISLSLKIPVPATSSSPSVPSSSSPASPPWVPPLCESPSKINQAPTPFAPYSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRRKGRMPHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHADSCNGXXXXXXXXXXXEAAWRAPRPRTPWAHRGESAAVAAGATTPIAAPXXXXXXXXXXXXXXXXXXXASSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAGERIRELAARGPGNSGGRERGGFERRGGGGGRQYEGYFDRFSAA 391
            MPDMDTPQISGI EE APXXXXXXXX VVGVQQASKRPRD+GSPVRGKRGRG NG+ISLSLKI VPATSSSP VPSSS PASP WVPPLCESPSKINQAP+PFA YS G XXXXXXXXXXXXXXXXXXXXXXXXX     TSRRKGRMPHAAPPSLGATDPIFHAALLRLLH RNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHA+SCNGXXXXXXXXXX EAAWRAPRPRTPWAHRG  AA AAG TTPIAAP     X              SSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSA ERIRELAA GPGNSGGRERGG ERRGG  GRQYEGYFDRFSAA
Sbjct:    1 MPDMDTPQISGIFEERAPXXXXXXXX-VVGVQQASKRPRDEGSPVRGKRGRGANGDISLSLKISVPATSSSPLVPSSSLPASPLWVPPLCESPSKINQAPSPFASYSSGAXXXXXXXXXXXXXXXXXXXXXXXXXASV--TSRRKGRMPHAAPPSLGATDPIFHAALLRLLHRRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHAESCNGXXXXXXXXXX-EAAWRAPRPRTPWAHRGRPAAAAAGVTTPIAAPSPLPPXASAQTPLSALRRSGSSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPGNSGGRERGGLERRGGDDGRQYEGYFDRFSAA 387
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BLAST of mRNA_Ecto-sp9_F_contig8886.17062.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ83_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 5.780e-106
Identity = 199/217 (91.71%), Postives = 200/217 (92.17%), Query Frame = 0 
Query:  148 MPHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHADSCNGXXXXXXXXXXX-EAAWRAPRPRTPWAHRGESAAVAAGATTPIAAPXXXXXXXXXXXXXXXXXXXASSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAGERIRELAARGPGNSG 363
            MPHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHADSC+GXXXXXXXXXXX EAAWRAPRPRTPWAHRG  AAV AGATT     XXXXXXXXXXXXXX      SSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSA ERIRELAA GPGNSG
Sbjct:    1 MPHAAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPCALHPSVMDLLACVSASEEQVVLTGCDKKHADSCHGXXXXXXXXXXXXEAAWRAPRPRTPWAHRGGPAAVPAGATTXXXXXXXXXXXXXXXXXXXALRRSGSSRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAAERIRELAAGGPGNSG 217
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8886.17062.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.760e-18387.21protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.780e-10691.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8886contigEcto-sp9_F_contig8886:4439..5629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8886.17062.1mRNA_Ecto-sp9_F_contig8886.17062.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8886 3680..5629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8886.17062.1 ID=prot_Ecto-sp9_F_contig8886.17062.1|Name=mRNA_Ecto-sp9_F_contig8886.17062.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=397bp
MPDMDTPQISGILEEHAPPPAAGGGGGVVGVQQASKRPRDDGSPVRGKRG
RGENGEISLSLKIPVPATSSSPSVPSSSSPASPPWVPPLCESPSKINQAP
TPFAPYSGGAAAAKPPALAADDAAAPVAGPAAAAAAVASATSRRKGRMPH
AAPPSLGATDPIFHAALLRLLHSRNGDHCAEAVGWRWRGDTPARFDHWPC
ALHPSVMDLLACVSASEEQVVLTGCDKKHADSCNGGGGDDPPPPRREAAW
RAPRPRTPWAHRGESAAVAAGATTPIAAPSPLPPPASAQTPLSALRRSAS
SRRLPSKNRVRFSTHDMSVVDTPDPQRGGSAKGMMSALGGLESILSAGER
IRELAARGPGNSGGRERGGFERRGGGGGRQYEGYFDRFSAAAGGEPD
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