prot_Ecto-sp9_F_contig888.17052.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig888.17052.1
Unique Nameprot_Ecto-sp9_F_contig888.17052.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length465
Homology
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BLAST of mRNA_Ecto-sp9_F_contig888.17052.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIU1_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 1.610e-171
Identity = 387/403 (96.03%), Postives = 393/403 (97.52%), Query Frame = 0 
Query:   62 LCLAALRIYLLNEQSHRLTASKRLESSLNLSAASLQTCRLCRETASFQLRVDDRTPRGVWEPRGEKPASYTNRREPPPGARLRALHARPSDSRASRTQRTAPPCSERSAMATTGRVPSMKISKVSWETSSPAELFFTPDNAGALHWLIEVRFGESVSVSVGGIVWPASLRRLAMKPSFEIRDMAXXXXXXXXXLEGRFDQPINEVXXXXXXXXXXXXXXXXXXXDDIGEKATGLRELTLGWNFDQSLVGVTLPKNLEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASWPPNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRQPLKGLAWPASLKTLTVGRAFDLTGVVLPGGARVCRSGHTAYQVQRGTKR 464
            L LAALRIYLLNEQSH LTASKRLESSLNLSAASLQTCRLCRET SFQLRVDDRTPRGVWEPRGEKPAS TNRR PPPGARLRALHARPSDSR+SRTQRTAPPCS+RSAMATTGRVPSMKISKVSWETSSPAELFFTPDNAGALHWLIEVRFGESVSVSVGGIVWPASLRRLA+K SFEIRDMAXXXXXXXXXLEGRFD+PINEVXXXXXXXXXXXXXXXXXXX DIG+KATGLRELTLGWNFDQ LVGVTLPKNLEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASWPPN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRQPLKGLAWPASLKTLTVGRAFDLTGVVLPGGARVCRSGHTA+QVQRG KR
Sbjct:    2 LYLAALRIYLLNEQSHHLTASKRLESSLNLSAASLQTCRLCRETTSFQLRVDDRTPRGVWEPRGEKPASNTNRRAPPPGARLRALHARPSDSRSSRTQRTAPPCSKRSAMATTGRVPSMKISKVSWETSSPAELFFTPDNAGALHWLIEVRFGESVSVSVGGIVWPASLRRLAIKRSFEIRDMAXXXXXXXXXLEGRFDEPINEVXXXXXXXXXXXXXXXXXXXXDIGQKATGLRELTLGWNFDQILVGVTLPKNLEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASWPPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRQPLKGLAWPASLKTLTVGRAFDLTGVVLPGGARVCRSGHTAFQVQRGAKR 404
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig888.17052.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.610e-17196.03protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIU1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 259..286
e-value: 2.2E-4
score: 21.3
coord: 326..367
e-value: 7.4E-5
score: 22.8
coord: 370..410
e-value: 7.9E-7
score: 29.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 229..439
e-value: 1.6E-9
score: 38.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 225..436
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 225..436
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 249..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig888contigEcto-sp9_F_contig888:2792..4639 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig888.17052.1mRNA_Ecto-sp9_F_contig888.17052.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig888 2675..7680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig888.17052.1 ID=prot_Ecto-sp9_F_contig888.17052.1|Name=mRNA_Ecto-sp9_F_contig888.17052.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=465bp
MVVPDDTDREGCAHDAFVNVGSRIAKNTSIGVSIVAQEDTRDPSCCPTPP
PSSSSGTPQSTLCLAALRIYLLNEQSHRLTASKRLESSLNLSAASLQTCR
LCRETASFQLRVDDRTPRGVWEPRGEKPASYTNRREPPPGARLRALHARP
SDSRASRTQRTAPPCSERSAMATTGRVPSMKISKVSWETSSPAELFFTPD
NAGALHWLIEVRFGESVSVSVGGIVWPASLRRLAMKPSFEIRDMAWPVRL
EQLALEGRFDQPINEVEWPESLQELIFGYHFNHPIDDIGEKATGLRELTL
GWNFDQSLVGVTLPKNLEVLTIAGVYNRPLDGVKLPSGLRSLTFGGLFDL
PLVSARLPERLESLRLGWAFDQPLLASWPPNLKTLALGYRFNQPVESVRL
PPSLEEFELGVFSRQPLKGLAWPASLKTLTVGRAFDLTGVVLPGGARVCR
SGHTAYQVQRGTKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf