prot_Ecto-sp9_F_contig885.17034.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig885.17034.1
Unique Nameprot_Ecto-sp9_F_contig885.17034.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length648
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig885.17034.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 107..145
e-value: 220.0
score: 2.2
coord: 586..626
e-value: 5.5
score: 12.3
coord: 155..194
e-value: 2.6E-4
score: 30.4
coord: 44..87
e-value: 490.0
score: 0.0
coord: 482..521
e-value: 1.1
score: 16.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 159..194
e-value: 0.0025
score: 18.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 162..194
score: 11.578
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 44..297
e-value: 1.2E-17
score: 66.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 463..642
e-value: 1.7E-10
score: 42.3
NoneNo IPR availablePANTHERPTHR44019FAMILY NOT NAMEDcoord: 113..632
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 162..203
score: 10.364
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 67..631

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig885contigEcto-sp9_F_contig885:18958..23692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig885.17034.1mRNA_Ecto-sp9_F_contig885.17034.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig885 18843..23694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig885.17034.1 ID=prot_Ecto-sp9_F_contig885.17034.1|Name=mRNA_Ecto-sp9_F_contig885.17034.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=648bp
MATRLRARPARRRGSARYPWSLQPVSRIALGHHPLGFVRRKAWTSAPVRF
GNGISAVTSLCLCDEASAGGPSLLISGDEDGGVSVQRVQTEREGGSEGSS
PSPPGWLGTPERTRLHSSCVNTIKTLPDQRGYVCAGDDGALSAVATFETC
SEEDLRRATFTLTGHSSFVTDCDTAESGHAILSSSTDGRMLLWDPVATNT
PVASVSVGRPVNSACFSAGDPYALLCAPELGTNCTREHGNDDLVQIWDLR
SLRCFKDAIPTAVATAFGEDPPATTPHDASMQPPPPQSPQFWATSTTRRS
TARTPAHVPPWLSTVLGSSVPSPATPLLRRPAWTGDTNDAESVASSTRGS
RERCSYETPSGKENDFPLRSSGSTTSRISSASSSCSNSPWSGSRGGIEGA
SNPGLNPSPSSKDRGQQGPARPTRKVLLPARDEPHVRLSVSSLPASGCLH
EGNGKTWIPGGLKTWQASRRRVRTAGARVCAGEACVACSNSAAASACSVQ
VSSDGKGILVGSRNRTVTLFDTQSHEVVYRFGHPSLSRARPVLVESSPNG
GVGGWGRGRGGTGRGDVFAGTKEGELRSWRVGSQFPNRVFKKANHHQGFE
IYSVAISNSGCMFASSDSSGAVYVQSATSGRDAQDSSGADAKRSGGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam