prot_Ecto-sp9_F_contig8843.17027.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8843.17027.1
Unique Nameprot_Ecto-sp9_F_contig8843.17027.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length1336
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8843.17027.1 vs.
Match: Similar (to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 391 bits (1005), Expect = 7.590e-109
Identity = 274/313 (87.54%), Postives = 277/313 (88.50%), Query Frame = 0 
Query:    1 QTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAKAXXXXXXXXXXXXXXXXXXRAGDGAVPFTPPATRRGPAXXXXXXXXXXXXXAERVLPEQTMYVSEKQRVHLAAVTIQRWWAAGAEGRLRRLGRSAGATAVQAAWRGKAARRAASSRREELAEQAKRELEKRINEVAASIQAAVRGRFERKAFLRARDASAVLQMWTRGRLQRMRYLALIQQVSAAVLLQSWARGLAGRRRADAAREVRQMQLQAAAENSAATTVQAWRXMLSARSXXXXXXQAAVRIQAVARGRAEASLYRK 313
            +TIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAKAXXXXXXXXXXXXXXXXXXRAGDGAVPFTPPATRRGPAXXXXXXX      AERVLPEQTMYVSEKQRVHLAAVTIQ WWAAGAEGRLRRLGRSA ATAVQAAWRGKAARRAASSRREELAEQA+RELEKRI E A SIQAAVRGRFERKAFLRARDASAVLQMWTRGRLQR RYLALI+QVSAA         LAGRRRADAAREVRQMQLQAAAENS         X      XXXXXXQAAVRIQAVARGRAEASLYRK
Sbjct:  907 KTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAKAXXXXXXXXXXXXXXXXXXRAGDGAVPFTPPATRRGPAXXXXXXX------AERVLPEQTMYVSEKQRVHLAAVTIQGWWAAGAEGRLRRLGRSAAATAVQAAWRGKAARRAASSRREELAEQAERELEKRIIEAAGSIQAAVRGRFERKAFLRARDASAVLQMWTRGRLQRTRYLALIRQVSAAXXXXXXXXXLAGRRRADAAREVRQMQLQAAAENSXXXXXXXXXXXXXXXXXXXXXXQAAVRIQAVARGRAEASLYRK 1213
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8843.17027.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.950e-77
Identity = 213/313 (68.05%), Postives = 219/313 (69.97%), Query Frame = 0 
Query:    1 QTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAKAXXXXXXXXXXXXXXXXXXRAGDGAVPFTPPATRRGPAXXXXXXXXXXXXXAERVLPEQTMYVSEKQRVHLAAVTIQRWWAAGAEGRLRRLGRSAGATAVQAAWRGKAARRAASSRREELAEQAKRELEKRINEVAASIQAAVRGRFERKAFLRARDASAVLQMWTRGRLQRMRYLALIQQVSAAVLLQSWARGLAGRRRADAAREVRQMQLQAAAENSAATTVQAWRXMLSARSXXXXXXQAAVRIQAVARGRAEASLYRK 313
            +TIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAKAXXXXXXXXXXXXXXXXXXRAGDGA PFTPPATRRGPA             AERVLPEQTMYVSEKQRVHLAA+TIQRWWAAGA+GRLRRLG SA AT VQAAWRGKAARRAASSRREELAEQA+R LEKRINE AASIQA VRGR                           RYLALI+Q                              LQAAAENSAATTVQAWR MLSAR       Q        ARGRAEA+LY K
Sbjct:  776 KTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAKAXXXXXXXXXXXXXXXXXXRAGDGAAPFTPPATRRGPAAVAEA--------AERVLPEQTMYVSEKQRVHLAALTIQRWWAAGADGRLRRLGWSAAATVVQAAWRGKAARRAASSRREELAEQAERGLEKRINEAAASIQAVVRGRLXXXXXXXXXXXXXXXXXXXXXXXXXXRYLALIRQ------------------------------LQAAAENSAATTVQAWRRMLSARRKLSTARQXXXXXXXXARGRAEANLYPK 1050
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8843.17027.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Similar7.590e-10987.54to asp (Abnormal spindle)-like, microcephaly assoc... [more]
Uncharacterized2.950e-7768.05protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 987..1009
NoneNo IPR availableCOILSCoilCoilcoord: 161..189
NoneNo IPR availableCOILSCoilCoilcoord: 1014..1034
NoneNo IPR availableGENE3D1.20.5.190coord: 690..742
e-value: 2.6E-7
score: 32.2
coord: 621..673
e-value: 1.7E-5
score: 26.3
NoneNo IPR availableGENE3D1.20.5.190coord: 1157..1198
e-value: 2.9E-9
score: 38.5
coord: 347..388
e-value: 1.2E-5
score: 27.0
coord: 897..940
e-value: 4.9E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR22590UNCHARACTERIZEDcoord: 551..867
coord: 1204..1333
coord: 692..1261
coord: 345..690
coord: 147..458
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 1054..1076
e-value: 5.7
score: 15.7
coord: 828..850
e-value: 2.9
score: 16.9
coord: 1178..1200
e-value: 0.16
score: 21.0
coord: 897..919
e-value: 0.41
score: 19.7
coord: 736..758
e-value: 130.0
score: 4.5
coord: 391..413
e-value: 52.0
score: 7.8
coord: 667..689
e-value: 120.0
score: 4.8
coord: 529..551
e-value: 300.0
score: 1.4
coord: 1155..1177
e-value: 0.21
score: 20.7
coord: 552..574
e-value: 1.2
score: 18.2
coord: 920..942
e-value: 330.0
score: 1.1
coord: 267..289
e-value: 77.0
score: 6.3
coord: 621..643
e-value: 37.0
score: 9.0
coord: 1310..1332
e-value: 40.0
score: 8.7
coord: 506..528
e-value: 76.0
score: 6.4
coord: 460..482
e-value: 13.0
score: 12.7
coord: 943..965
e-value: 1.2
score: 18.1
coord: 759..781
e-value: 51.0
score: 7.9
coord: 368..390
e-value: 13.0
score: 12.6
coord: 205..227
e-value: 12.0
score: 12.9
coord: 713..735
e-value: 190.0
score: 3.1
coord: 782..804
e-value: 320.0
score: 1.3
coord: 575..597
e-value: 160.0
score: 3.7
coord: 143..165
e-value: 130.0
score: 4.6
coord: 1224..1246
e-value: 32.0
score: 9.5
coord: 437..459
e-value: 250.0
score: 2.2
coord: 182..204
e-value: 1.5
score: 17.8
coord: 313..335
e-value: 99.0
score: 5.4
coord: 690..712
e-value: 2.5
score: 17.1
coord: 598..620
e-value: 10.0
score: 13.7
coord: 414..436
e-value: 32.0
score: 9.6
coord: 290..312
e-value: 350.0
score: 0.9
coord: 1031..1053
e-value: 0.33
score: 20.0
coord: 1262..1284
e-value: 1.8
score: 17.6
coord: 345..367
e-value: 26.0
score: 10.3
coord: 805..827
e-value: 26.0
score: 10.2
coord: 231..253
e-value: 5.9
score: 15.6
coord: 483..505
e-value: 260.0
score: 2.0
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 1033..1053
e-value: 0.12
score: 12.2
coord: 601..620
e-value: 0.23
score: 11.3
coord: 1158..1176
e-value: 0.019
score: 14.7
coord: 1181..1198
e-value: 0.015
score: 15.0
coord: 555..574
e-value: 0.22
score: 11.4
coord: 831..850
e-value: 0.071
score: 12.9
coord: 348..363
e-value: 0.062
score: 13.1
coord: 899..917
e-value: 0.025
score: 14.3
coord: 947..965
e-value: 0.047
score: 13.5
coord: 693..712
e-value: 0.045
score: 13.6
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 829..855
score: 8.535
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 291..320
score: 7.638
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 507..536
score: 6.668
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 967..996
score: 6.833
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 624..649
score: 7.291
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 553..579
score: 7.126
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1225..1253
score: 6.961
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1032..1060
score: 9.377
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 693..717
score: 7.968
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 760..787
score: 7.236
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 438..464
score: 6.742
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 714..741
score: 6.723
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 346..374
score: 8.261
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1263..1289
score: 7.382
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 369..397
score: 7.035
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1202..1231
score: 7.858
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 183..211
score: 7.181
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 314..343
score: 8.151
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1156..1185
score: 8.316
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 415..444
score: 7.437
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 232..260
score: 6.76
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1179..1208
score: 7.144
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 461..490
score: 6.943
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 898..927
score: 8.425
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 206..235
score: 6.852
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 144..173
score: 8.37
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 484..513
score: 6.833
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 944..973
score: 9.029
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 1057..1084
score: 7.218
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 716..811
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 180..252
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 650..740
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 584..653
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 371..465

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8843contigEcto-sp9_F_contig8843:40..5532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8843.17027.1mRNA_Ecto-sp9_F_contig8843.17027.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8843 40..5532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8843.17027.1 ID=prot_Ecto-sp9_F_contig8843.17027.1|Name=mRNA_Ecto-sp9_F_contig8843.17027.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1336bp
QTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAA
KARARSKAAAERAAAAAALARAGDGAVPFTPPATRRGPAAAAAAAAAAAA
AAAERVLPEQTMYVSEKQRVHLAAVTIQRWWAAGAEGRLRRLGRSAGATA
VQAAWRGKAARRAASSRREELAEQAKRELEKRINEVAASIQAAVRGRFER
KAFLRARDASAVLQMWTRGRLQRMRYLALIQQVSAAVLLQSWARGLAGRR
RADAAREVRQMQLQAAAENSAATTVQAWRRMLSARSQLSAARQAAVRIQA
VARGRAEASLYRKKRAAVIAVQAAQRGTTARARLSRERAAKRAAAEHTAA
VRLQALCRGVLARGRRHRQETAATLLQARARGAAARKQAARRGVAVAVLQ
RWGRAALERRRYRWAVAAASVVQAWARGAVARRAVSERRAAVMRVQAWAR
GALEAGRHRRRLRAAVVLQAWRRGVMERARTDARRRAAVRVQAIARGRRE
ASLFRGKRAAAVRVQAWSRATVVRGELAARQRASVRLQAWARARRQGRGF
QEAKRATVVVQAWWRGVSAARSFRKLVRAAVVAQARARAVVAAARYRRTV
DAAKMIQSHWRAALAVARYRKDINAVVRVQANWRAALEKSRYRRTKEAVV
VVQAYVRGAAEAACYRRSLAAVVVIQSGFRRAAAVARYRKDVSAVVRIQA
CWRAALERSRYRRTKEAAVVVQAYLRGAAEAARYRRTVAAIVVVQSGFRR
AAAVARYRKDANAVVRIQARWRSALEKSRFRRTIAAVVVVQAHARGAAEA
ARYRRTLAAVVVVQSGFRRAVAVARYRKHANAVVRIQALWRAALERSRYR
RTVAAAVVVQARRRRAVAQTCYRKLVGAAVVVQSRRRGAAAATAYRRNRA
AAVTVQSAMRGALARRELARQAGRATQIEAWWRMVTARSLAGRQKGSAVR
LQAAWRGAVARAAYRRAVDGTARFQALVRGAQSRARLARERQEIEAAVLL
ARAQEAEAAAASAIQAWRRRRVAARRRRAEAERAAAVRMQAAVRGAVARR
AFRAAIAAATMVQARARGQRARRDQARRAVAATRIQSAARAAAACARVAR
RRAQRRAMLASAVIRRVWRGAAARAMLSRRTVAAAAVQRRWWRSILNEAR
RQEALEQSSATLLQACSRGHLARAALRREASAAVAIQAHWRGVSARSRAA
GRFAAAVRLQALGRGALATARFRRTRAAASAVQARWRGAAARSRLAAEAA
AAAVAAEIRAAREESAARTLQAFARGTLERAELRRAEAAAVVVQRAWRWM
LLLLRRREREVATAAVAVQAWWRMASARADCRLAR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR027417P-loop_NTPase