prot_Ecto-sp9_F_contig8840.17024.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8840.17024.1
Unique Nameprot_Ecto-sp9_F_contig8840.17024.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8840.17024.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG5_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.630e-51
Identity = 108/122 (88.52%), Postives = 108/122 (88.52%), Query Frame = 0 
Query:    1 MRAAGAAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARVIARAEIATGGGAAAA--------RNTGSGSVPRPGSGQASDGGPYAAAKAAPLYLLLETGNGFVGVGNKGKD 114
            MRAAGAAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARVIARAEIAT   AAA         RNTGSGSVPRPGSGQASDGG YAAAKAAPLYLLLETGNGFVGVGNK KD
Sbjct:  323 MRAAGAAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARVIARAEIAT---AAAXXXXXXXXXRNTGSGSVPRPGSGQASDGGTYAAAKAAPLYLLLETGNGFVGVGNKEKD 441
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BLAST of mRNA_Ecto-sp9_F_contig8840.17024.1 vs.
Match: UBA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B9_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.080e-45
Identity = 96/119 (80.67%), Postives = 100/119 (84.03%), Query Frame = 0 
Query:    1 MRAAGAAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARVIARAEIATGGGAAAAR-----NTGSGSVPRPGSGQASDGGPYAAAKAAPLYLLLETGNGFVGVGNKGKD 114
            MRAA AAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAAR +ARAEIA              NTGSGSVPR GSGQASDGG YAAA A+PLYLLLETGNGFVGVGNKG++
Sbjct:  708 MRAASAAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARAVARAEIAAXXXXXXXXXXXXGNTGSGSVPRLGSGQASDGGTYAAANASPLYLLLETGNGFVGVGNKGQN 826
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8840.17024.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.630e-5188.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
UBA4.080e-4580.67domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8840contigEcto-sp9_F_contig8840:3362..3703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8840.17024.1mRNA_Ecto-sp9_F_contig8840.17024.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8840 3345..3703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8840.17024.1 ID=prot_Ecto-sp9_F_contig8840.17024.1|Name=mRNA_Ecto-sp9_F_contig8840.17024.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=114bp
MRAAGAAERDALREFLAREPASEMSKVEVDVCRELPILPLHEDGLVAARV
IARAEIATGGGAAAARNTGSGSVPRPGSGQASDGGPYAAAKAAPLYLLLE
TGNGFVGVGNKGKD
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